Volume 17; Issue 7

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Environmental Microbiology
Volume 17; Issue 7

Environmental Microbiology

Volume 17; Issue 7

1

The FlxABCD-HdrABC proteins correspond to a novel NADH dehydrogenase/heterodisulfide reductase widespread in anaerobic bacteria and involved in ethanol metabolism in D esulfovibrio vulgaris Hildenborough

Ramos, Ana Raquel, Grein, Fabian, Oliveira, Gonçalo P., Venceslau, Sofia S., Keller, Kimberly L., Wall, Judy D., Pereira, Inês A. C.

Journal:

Environmental Microbiology

Année:

2015

Langue:

english

Fichier:

PDF, 2.15 MB

english, 2015

2

Colonization of rice roots with methanogenic archaea controls photosynthesis-derived methane emission

Pump, Judith, Pratscher, Jennifer, Conrad, Ralf

Journal:

Environmental Microbiology

Année:

2015

Langue:

english

Fichier:

PDF, 666 KB

english, 2015

3

Seeing is believing: novel imaging techniques help clarify microbial nanowire structure and function

Lovley, Derek R., Malvankar, Nikhil S.

Journal:

Environmental Microbiology

Année:

2015

Langue:

english

Fichier:

PDF, 603 KB

english, 2015

4

Functional adaptations of the bacterial chaperone trigger factor to extreme environmental temperatures

Godin-Roulling, Amandine, Schmidpeter, Philipp A. M., Schmid, Franz X., Feller, Georges

Journal:

Environmental Microbiology

Année:

2015

Langue:

english

Fichier:

PDF, 1.72 MB

english, 2015

5

Distribution of small phytoflagellates along an Arctic fjord transect

Piwosz, Kasia, Spich, Katarzyna, Całkiewicz, Joanna, Weydmann, Agata, Kubiszyn, Anna M., Wiktor, Józef M.

Journal:

Environmental Microbiology

Année:

2015

Langue:

english

Fichier:

PDF, 1.39 MB

english, 2015

6

Characterization of the cultivable bacterial populations associated with field grown B rassica napus L.: an evaluation of sampling and isolation protocols

Croes, Sarah, Weyens, Nele, Colpaert, Jan, Vangronsveld, Jaco

Journal:

Environmental Microbiology

Année:

2015

Langue:

english

Fichier:

PDF, 1.67 MB

english, 2015

7

The archaeal lipidome in estuarine sediment dominated by members of the Miscellaneous Crenarchaeotal Group

Meador, Travis B., Bowles, Marshall, Lazar, Cassandre S., Zhu, Chun, Teske, Andreas, Hinrichs, Kai-Uwe

Journal:

Environmental Microbiology

Année:

2015

Langue:

english

Fichier:

PDF, 1007 KB

english, 2015

8

Key respiratory genes elucidate bacterial community respiration in a seasonally anoxic estuary

Eggleston, Erin M., Lee, Dong Y., Owens, Michael S., Cornwell, Jeffrey C., Crump, Byron C., Hewson, Ian

Journal:

Environmental Microbiology

Année:

2015

Langue:

english

Fichier:

PDF, 848 KB

english, 2015

9

Spatial structuring of bacterial communities within individual G inkgo biloba trees

Leff, Jonathan W., Del Tredici, Peter, Friedman, William E., Fierer, Noah

Journal:

Environmental Microbiology

Année:

2015

Langue:

english

Fichier:

PDF, 775 KB

english, 2015

10

Insights from genomes of representatives of the human gut commensal B ifidobacterium bifidum

Duranti, Sabrina, Milani, Christian, Lugli, Gabriele Andrea, Turroni, Francesca, Mancabelli, Leonardo, Sanchez, Borja, Ferrario, Chiara, Viappiani, Alice, Mangifesta, Marta, Mancino, Walter, Gueimonde

Journal:

Environmental Microbiology

Année:

2015

Langue:

english

Fichier:

PDF, 1.83 MB

english, 2015

11

The production of nitric oxide by marine ammonia-oxidizing archaea and inhibition of archaeal ammonia oxidation by a nitric oxide scavenger

Martens-Habbena, Willm, Qin, Wei, Horak, Rachel E. A., Urakawa, Hidetoshi, Schauer, Andrew J., Moffett, James W., Armbrust, E. Virginia, Ingalls, Anitra E., Devol, Allan H., Stahl, David A.

Journal:

Environmental Microbiology

Année:

2015

Langue:

english

Fichier:

PDF, 966 KB

english, 2015

12

Environmental rather than spatial factors structure bacterioplankton communities in shallow lakes along a > 6000 km latitudinal gradient in South America

Souffreau, Caroline, Van der Gucht, Katleen, van Gremberghe, Ineke, Kosten, Sarian, Lacerot, Gissell, Lobão, Lúcia Meirelles, de Moraes Huszar, Vera Lúcia, Roland, Fabio, Jeppesen, Erik, Vyverman, Wim

Journal:

Environmental Microbiology

Année:

2015

Langue:

english

Fichier:

PDF, 914 KB

english, 2015

13

Microbial biogeography of drinking water: patterns in phylogenetic diversity across space and time

Roeselers, Guus, Coolen, Jordy, van der Wielen, Paul W. J. J., Jaspers, Marco C., Atsma, Adrie, de Graaf, Bendert, Schuren, Frank

Journal:

Environmental Microbiology

Année:

2015

Langue:

english

Fichier:

PDF, 1.18 MB

english, 2015

14

Alteration of cyanobacterial sugar and amino acid metabolism by overexpression hik 8 , encoding a KaiC-associated histidine kinase

Osanai, Takashi, Shirai, Tomokazu, Iijima, Hiroko, Kuwahara, Ayuko, Suzuki, Iwane, Kondo, Akihiko, Hirai, Masami Yokota

Journal:

Environmental Microbiology

Année:

2015

Langue:

english

Fichier:

PDF, 1.68 MB

english, 2015

15

Abiotic stress protection by ecologically abundant dimethylsulfoniopropionate and its natural and synthetic derivatives: insights from B acillus subtilis

Broy, Sebastian, Chen, Chiliang, Hoffmann, Tamara, Brock, Nelson L., Nau-Wagner, Gabriele, Jebbar, Mohamed, Smits, Sander H. J., Dickschat, Jeroen S., Bremer, Erhard

Journal:

Environmental Microbiology

Année:

2015

Langue:

english

Fichier:

PDF, 799 KB

english, 2015

16

Disentangling seasonal bacterioplankton population dynamics by high-frequency sampling

Lindh, Markus V., Sjöstedt, Johanna, Andersson, Anders F., Baltar, Federico, Hugerth, Luisa W., Lundin, Daniel, Muthusamy, Saraladevi, Legrand, Catherine, Pinhassi, Jarone

Journal:

Environmental Microbiology

Année:

2015

Langue:

english

Fichier:

PDF, 1.87 MB

english, 2015

17

Growth promotion and gut microbiota: insights from antibiotic use

Brüssow, Harald

Journal:

Environmental Microbiology

Année:

2015

Langue:

english

Fichier:

PDF, 1.09 MB

english, 2015

18

The effects of variable sample biomass on comparative metagenomics

Chafee, Meghan, Maignien, Loïs, Simmons, Sheri L.

Journal:

Environmental Microbiology

Année:

2015

Langue:

english

Fichier:

PDF, 1.06 MB

english, 2015

19

Environmental controls on intragroup diversity of the uncultured benthic archaea of the miscellaneous Crenarchaeotal group lineage naturally enriched in anoxic sediments of the White Oak River estuary (North Carolina, USA)

Lazar, Cassandre Sara, Biddle, Jennifer F., Meador, Travis B., Blair, Nic, Hinrichs, Kai-Uwe, Teske, Andreas P.

Journal:

Environmental Microbiology

Année:

2015

Langue:

english

Fichier:

PDF, 961 KB

english, 2015

20

SecReT6: a web-based resource for type VI secretion systems found in bacteria

Li, Jun, Yao, Yufeng, Xu, H. Howard, Hao, Limin, Deng, Zixin, Rajakumar, Kumar, Ou, Hong-Yu

Journal:

Environmental Microbiology

Année:

2015

Langue:

english

Fichier:

PDF, 1.04 MB

english, 2015

21

Heavy water and 15 N labelling with NanoSIMS analysis reveals growth rate-dependent metabolic heterogeneity in chemostats

Kopf, Sebastian H., McGlynn, Shawn E., Green-Saxena, Abigail, Guan, Yunbin, Newman, Dianne K., Orphan, Victoria J.

Journal:

Environmental Microbiology

Année:

2015

Langue:

english

Fichier:

PDF, 1.20 MB

english, 2015

22

In situ DNA-hybridization chain reaction (HCR): a facilitated in situ HCR system for the detection of environmental microorganisms

Yamaguchi, Tsuyoshi, Kawakami, Shuji, Hatamoto, Masashi, Imachi, Hiroyuki, Takahashi, Masanobu, Araki, Nobuo, Yamaguchi, Takashi, Kubota, Kengo

Journal:

Environmental Microbiology

Année:

2015

Langue:

english

Fichier:

PDF, 627 KB

english, 2015

23

Prokaryotic genes in eukaryotic genome sequences: when to infer horizontal gene transfer and when to suspect an actual microbe

Artamonova, Irena I., Lappi, Tanya, Zudina, Liudmila, Mushegian, Arcady R.

Journal:

Environmental Microbiology

Année:

2015

Langue:

english

Fichier:

PDF, 111 KB

english, 2015

24

Adaptation of anaerobic cultures of E scherichia coli K-12 in response to environmental trimethylamine-N-oxide

Denby, Katie J., Rolfe, Matthew D., Crick, Ellen, Sanguinetti, Guido, Poole, Robert K., Green, Jeffrey

Journal:

Environmental Microbiology

Année:

2015

Langue:

english

Fichier:

PDF, 699 KB

english, 2015

25

Thermally adaptive tradeoffs in closely related marine bacterial strains

Yung, Cheuk-Man, Vereen, Marissa K., Herbert, Amy, Davis, Katherine M., Yang, Jiayu, Kantorowska, Agata, Ward, Christopher S., Wernegreen, Jennifer J., Johnson, Zackary I., Hunt, Dana E.

Journal:

Environmental Microbiology

Année:

2015

Langue:

english

Fichier:

PDF, 1003 KB

english, 2015

26

Microbial growth on reduced C 1 compounds

Wackett, Lawrence P.

Journal:

Environmental Microbiology

Année:

2015

Langue:

english

Fichier:

PDF, 93 KB

english, 2015

27

Proteomics of C olwellia psychrerythraea at subzero temperatures - a life with limited movement, flexible membranes and vital DNA repair

Nunn, Brook L., Slattery, Krystal V., Cameron, Karen A., Timmins-Schiffman, Emma, Junge, Karen

Journal:

Environmental Microbiology

Année:

2015

Langue:

english

Fichier:

PDF, 532 KB

english, 2015

28

Combined effects of zooplankton grazing and dispersal on the diversity and assembly mechanisms of bacterial metacommunities

Berga, Mercè, Östman, Örjan, Lindström, Eva S., Langenheder, Silke

Journal:

Environmental Microbiology

Année:

2015

Langue:

english

Fichier:

PDF, 525 KB

english, 2015

29

A novel pathway for the synthesis of inositol phospholipids uses cytidine diphosphate (CDP)-inositol as donor of the polar head group

Jorge, Carla D., Borges, Nuno, Santos, Helena

Journal:

Environmental Microbiology

Année:

2015

Langue:

english

Fichier:

PDF, 947 KB

english, 2015

30

A growing focus on bacterial individuality

Ackermann, Martin, Schreiber, Frank

Journal:

Environmental Microbiology

Année:

2015

Langue:

english

Fichier:

PDF, 93 KB

english, 2015