Volume 226-227

Main
Cancer Genetics
Volume 226-227

Cancer Genetics

Volume 226-227

1

Non-invasive early detection of malignant pulmonary nodules by FISH-based sputum test

Shlomi, Dekel, Peled, Nir, Schwarz, Yehuda A., Soo Hoo, Guy W., Batra, Raj K., Fink, Gershon, Kaplan, Tal, Mollan, Scott, Burfeind Jr., William R.

Journal:

Cancer Genetics

Année:

2018

Langue:

english

Fichier:

PDF, 1024 KB

english, 2018

2

Clonal neutrophil infiltrates in concurrent Sweet's syndrome and acute myeloid leukemia: A case report and literature review

Mo, Wenbin, Wang, Xiaoxue, Wang, Yue, Li, Yan, Zhang, Rui

Journal:

Cancer Genetics

Année:

2018

Langue:

english

Fichier:

PDF, 1.52 MB

english, 2018

3

Challenges in next generation sequencing analysis of somatic mutations in transplant patients

Chen, Hui, Luthra, Rajyalakshmi, Patel, Keyur P, Routbort, Mark, Rashid, Asif, Roy-Chowdhuri, Sinchita, Lazar, Alexander, Broaddus, Russell, Manekia, Jawad, Singh, Rajesh R, Yemelyanova, Anna

Journal:

Cancer Genetics

Année:

2018

Langue:

english

Fichier:

PDF, 379 KB

english, 2018

4

Differentially expressed LncRNAs as potential prognostic biomarkers for glioblastoma

Shao, Mei, Liu, Wenyun, Wang, Yu

Journal:

Cancer Genetics

Année:

2018

Langue:

english

Fichier:

PDF, 1.27 MB

english, 2018

5

14. A novel cytogenomic approach to diagnosis of plasma cell neoplasms

Aarabi, Mahmoud, Davenport, Faith, Austin, Michaelia, Reed, Megan, Casey, Jane, Lawrence, Chad, Yatsenko, Svetlana

Journal:

Cancer Genetics

Année:

2018

Langue:

english

Fichier:

PDF, 48 KB

english, 2018

6

11. Utilization of multimodality testing data to develop an optimal diagnostic algorithm for pediatric leukemia

Raca, Gordana, Hiemenz, Matthew, Ji, Jianling, Oberley, Matthew, Bhojwani, Deepa, Biegel, Jaclyn

Journal:

Cancer Genetics

Année:

2018

Langue:

english

Fichier:

PDF, 44 KB

english, 2018

7

12. Pediatric oncology testing in the front-line setting: Utility of the CHLA OncoKids panel

Biegel, Jaclyn, Raca, Gordana, Ji, Jianling, Cotter, Jennifer, Shimada, Hiroyuki, Zhou, Shengmei, Shillingford, Nicholas, Warren, Mika, Hawes, Debra, Tian, Di, Oberley, Matthew, Navid, Fariba, Shah, R

Journal:

Cancer Genetics

Année:

2018

Langue:

english

Fichier:

PDF, 45 KB

english, 2018

8

15. Genomic and clinical characterization of early T-cell precursor acute lymphoblastic lymphoma (ETP-LBL)

Xu, Xinjie, Paxton, Christian N., Hayashi, Robert J., Perkins, Sherrie L., Miles, Rodney R.

Journal:

Cancer Genetics

Année:

2018

Langue:

english

Fichier:

PDF, 48 KB

english, 2018

9

18. ALLELE: A consortium for prospective genomics and functional diagnostics to guide patient care and trial analysis in newly-diagnosed glioblastoma

Dubuc, Adrian M., Touat, Mehdi, Meredith, David M., Gaffey, Sarah C., Geduldig, Jack E., Ramkissoon, Shakt, de Groot, John F., Galanis, Evanthia, Lassman, Andrew B., Nabors, Burt, Arrilaga-Romany, Isa

Journal:

Cancer Genetics

Année:

2018

Langue:

english

Fichier:

PDF, 78 KB

english, 2018

10

25. RNAseq analysis of PD-L1 expression in colorectal and endometrial tumors and correlation with microsatellite instability

Diguardo, Maggie, Zarei, Shabnam, Jackson, Rory, Nair, Asha, Davila, Jaime, Halling, Kevin

Journal:

Cancer Genetics

Année:

2018

Langue:

english

Fichier:

PDF, 49 KB

english, 2018

11

16. Australian AIEOP-BFM 2009 acute lymphoblastic leukaemia high-risk findings – Enrichment of IKZF1 deletions and other curious findings

Berry, Nadine, Scott, Rodney J., Sutton, Rosemary, Trahair, Toby N., Rowlings, Philip, Enjeti, Anoop K.

Journal:

Cancer Genetics

Année:

2018

Langue:

english

Fichier:

PDF, 81 KB

english, 2018

12

5. Progress and future of the compendium of Cancer Genome Aberrations (CCGA)

Hodge, Jennelle C., Cooley, Linda, Chen, Hui, Yang, Fei, Griffith, Obi, Baughn, Linda, Newman, Scott, Wolff, Daynna J.

Journal:

Cancer Genetics

Année:

2018

Langue:

english

Fichier:

PDF, 72 KB

english, 2018

13

44. Constitutional chromotripsis case: 4 deletions and 9 breaks involving 2 chromosomes in a patient referred for short stature and global developmental delay

Fortin, Flechere, Chenier, Sebastien

Journal:

Cancer Genetics

Année:

2018

Langue:

english

Fichier:

PDF, 92 KB

english, 2018

14

32. Chronic lymphocytic leukemia patients who develop resistance to Bruton Tyrosine Kinase (BTK) inhibitors demonstrate heterogeneous patterns of clonal evolution

Kanagal-Shamanna, Rashmi, Jain, Preetesh, Patel, Keyur, Bueso-Ramos, Carlos, Luthra, Rajyalakshmi, Routbort, Mark, Estrov, Zeev, Wierda, William, Medeiros, L. Jeffrey

Journal:

Cancer Genetics

Année:

2018

Langue:

english

Fichier:

PDF, 47 KB

english, 2018

15

1. Clinical utility of mate pair sequencing to detect diagnostic and prognostic chromosomal rearrangements and copy number changes in patients with acute myeloid leukemia

Baughn, Linda, Smoley, Stephanie, Pitel, Beth, Vasmatzis, George, Johnson, Sarah, Smadbeck, James, Peterson, Jess, Van Dyke, Daniel, Ketterling, Rhett, Jenkins, Robert, Hoppman, Nicole, Kearney, Hutto

Journal:

Cancer Genetics

Année:

2018

Fichier:

PDF, 119 KB

2018

16

2. Distinct genetic signature of a high risk AML subgroup with ERG amplification

Znoyko, Iya, Schandl, Cynthia, Wolff, Daynna

Journal:

Cancer Genetics

Année:

2018

Fichier:

PDF, 148 KB

2018

17

3. Building risk scores for evaluating survival after hematopoietic cell transplantation for AML using pre-transplant cytogenetic data

Li, Yi, Gooley, Ted, Davis, Chris, Silgard, Emily, Sorror, Mohamed L., Ueda, Masumi, Nyland, Jennifer E., Zhao, Lue, Fang, Min

Journal:

Cancer Genetics

Année:

2018

Fichier:

PDF, 47 KB

2018

18

4. Coordinating variant interpretation knowledgebases improves clinical interpretation of genomic variants in cancers

Wagner, Alex, Walsh, Brian, Sonkin, Dmitriy, Dienstmann, Rodrigo, Li, Xuan Shirley, Beckmann, Jacques S., Mayfield, Georgia, Tamborero, David, Lopez-Bigas, Nuria, Goecks, Jeremy, Margolin, Adam, Griff

Journal:

Cancer Genetics

Année:

2018

Fichier:

PDF, 47 KB

2018

19

6. Human ring chromosome registry: Developing an interactive web resource for constitutional and cancer cytogenomic diagnosis

Li, Peining, DiAdamo, Autumn, Grommisch, Brittany, Chai, Hongyan, Hu, Qiping

Journal:

Cancer Genetics

Année:

2018

Fichier:

PDF, 41 KB

2018

20

8. A comparative analysis of reimbursement for molecular pathology testing for neoplasia

Chiu, Melissa, Kroeger, Kathleen, Qu, Xiaoyu, Fang, Min

Journal:

Cancer Genetics

Année:

2018

Fichier:

PDF, 42 KB

2018

21

9. Integrating clinical microarray analyses in the myeloma diagnostic workup: Rationale for improving patient care with precision medicine while reducing overall cost of testing

Murata-Collins, Joyce, Padeganeh, Abbas

Journal:

Cancer Genetics

Année:

2018

Fichier:

PDF, 43 KB

2018

22

10. Comprehensive genomic characterization of pediatric B-ALL

Luo, Minjie, Lin, Fumin, Zhao, Xiaonan, Tang, Junxia, Akgumus, Gozde T., Gallo, Daniel J., Romasko, Edward, Gleason, Adam G., Surrey, Lea F., Wertheim, Gerald, Li, Marilyn M.

Journal:

Cancer Genetics

Année:

2018

Fichier:

PDF, 68 KB

2018

23

13. Clinical application of whole-genome arrays in diagnostic studies of pediatric solid tumors

Shao, Lina, Heider, Amer, Koschmann, Carl, Camelo-Piragua, Sandra, Rabah, Raja

Journal:

Cancer Genetics

Année:

2018

Fichier:

PDF, 73 KB

2018

24

17. Application of next-generation sequencing in diagnosis of patients with MDS and AML

Li, Jing, Hao, Jinxia, Li, Juan, Wu, Di, Zhang, Mei

Journal:

Cancer Genetics

Année:

2018

Fichier:

PDF, 50 KB

2018

25

19. Evidence-based review of genomic aberrations in T-ALL: Strategy and progress of CGC T-ALL Working Group

Akkari, Yassmine, Baugn, Linda, Bruyere, Helene, Hagelstrom, Tanner, Pitel, Beth, Raca, Gordana, Smolarek, Teresa, Yenamandra, Ashwini, Meredith, Matthew

Journal:

Cancer Genetics

Année:

2018

Fichier:

PDF, 46 KB

2018

26

20. Current concepts in breast cancer genomics: An evidence based review from the Cancer Genomics Consortium (CGC) Breast Cancer Workgroup

Geiersbach, Katherine, Liu, Yajuan, Haskell, Gloria, Chen, Hui, Lu, Xinyan, Swisshlem, Karen, Emmadi, Rajyasree, Fang, Min

Journal:

Cancer Genetics

Année:

2018

Fichier:

PDF, 82 KB

2018

27

21. Cancer curation in the clinical genome resource (on behalf of the ClinGen Somatic Working Group)

Raca, Gordana, Ritter, Deborah, Micheel, Christine, Sonkin, Dmitriy, McCoy, Matthew, McGarvey, Peter, Rao, Shruti, Li, Marilyn, Griffith, Malachi, Griffith, Obi, Roy, Angshumoy, Kulkarni, Shashikant,

Journal:

Cancer Genetics

Année:

2018

Fichier:

PDF, 54 KB

2018

28

22. Clinical utility of integrated genomic profiling in pediatric brain tumor

Lin, Fumin, Chang, Fengqi, Surrey, Lea, Akgumus, Gozde, Gallo, Daniel, Cao, Kajia, Santi, Mariarita, Waanders, Angela, Li, Marilyn

Journal:

Cancer Genetics

Année:

2018

Fichier:

PDF, 54 KB

2018

29

24. Integrated analysis and clinical interpretation of CNV, LOH, and sequence variants of FFPE cancer samples profiled on a solid tumor NGS panel

Murray, Sarah, Verma, Shalini, Keshavan, Raja, Shams, Soheil

Journal:

Cancer Genetics

Année:

2018

Fichier:

PDF, 49 KB

2018

30

27. Biomarker driven clinical trial curation and search

LeNoue-Newton, Michele, Jain, Neha, Anderson, Ingrid, Micheel, Christine, Levy, Mia

Journal:

Cancer Genetics

Année:

2018

Fichier:

PDF, 49 KB

2018

31

28. Creation, maintenance, and utility of a comprehensive and informative pan-cancer gene list to aid in interpretation of whole genomes in cancer

Pitel, Beth A., Gliem, Troy J., Knight, Shannon M., Zysk, Christopher D., Kipp, Benjamin R., Geiersbach, Katherine B., Greipp, Patricia T., Kearney, Hutton M., Baughn, Linda B.

Journal:

Cancer Genetics

Année:

2018

Fichier:

PDF, 87 KB

2018

32

29. Integrating ClinGen somatic cancer variant description standards into crowdsourced curation technology via CIViC database for ClinVar submission

Danos, Arpad, Ritter, Deborah, Krysiak, Kilannin, Sonkin, Dmitriy, Micheel, Christine, McCoy, Matthew, Rao, Shruti, Raca, Gordana, Boca, Simina, Roy, Angshumoy, Sidiropoulos, Nikoletta, Aisner, Dara,

Journal:

Cancer Genetics

Année:

2018

Fichier:

PDF, 54 KB

2018

33

30. Clinical utility of NGS in the understanding of crosstalk between nuclear cancer genes and mitochondrial genome in tumorigenesis

Zhao, Pei, Wang, Hao, Dai, Hong-Zheng, Yang, Tzu-Wei, Wong, Lee-Jun

Journal:

Cancer Genetics

Année:

2018

Fichier:

PDF, 53 KB

2018

34

31. Transcriptional alterations to blood monocytes in breast cancer reveal down regulation of anti-cancer pathways

Robinson, Amy, Skola, Dylan, Cassetta, Luca, Bain, Calum, Louwe, Peter, Lynch, Ruairi, Jenkins, Steve, Glass, Chris, Pollard, Jeff

Journal:

Cancer Genetics

Année:

2018

Fichier:

PDF, 84 KB

2018

35

33. Chromosomal abnormalities detected in clinical CMA testing of atypical melanocytic proliferations

Hughes, Edward, Johnston, Michael, Linos, Konstantinos, LeBlanc, Robert, Lefferts, Joel

Journal:

Cancer Genetics

Année:

2018

Fichier:

PDF, 80 KB

2018

36

34. Genome-wide mosaicism, chimerism, and contamination: Recognizing and interpreting genotyping patterns from SNP arrays

Conlin, Laura K., Luo, Minjie, Weckselblatt, Brooke, Rafferty, Kelly A., Kalish, Jennifer, Zackai, Elaine H., Dulik, Matthew A., Spinner, Nancy B.

Journal:

Cancer Genetics

Année:

2018

Fichier:

PDF, 48 KB

2018

37

35. PLOIDY and the array

Hauenstein, Jennifer, Liebenberg, Adrianna, Matthews, Beth, O'Hare, Cynthia, Thompson, Kim, Gramlich, Christina Fox, Sheff, Faith, Vigo, Enrique, Phillips, Carol, Williams, Jean, Deeb, Kristin, Neill,

Journal:

Cancer Genetics

Année:

2018

Fichier:

PDF, 48 KB

2018

38

36. FDA approved versus laboratory developed test: An exercise in comparisons utilizing UroVysion evaluation for bladder cancer

From, Christopher, Donovan, Christine, Stampalia, Ann, Morgan, Catherine, Wang, Sharon, Staley, Rong, Disteche, Christine, Liu, Yajuan, Fang, Min

Journal:

Cancer Genetics

Année:

2018

Fichier:

PDF, 84 KB

2018

39

37. Clinical validation of somatic alterations in solid tumors by next generation sequencing

Li, Xia, Austin, Bryan, Donovan, Michael, Orton, Janet, Liu, Guang

Journal:

Cancer Genetics

Année:

2018

Fichier:

PDF, 50 KB

2018

40

38. The role of CYP2D6 Single Nucleotide Polymorphism (SNP) for the prediction and treatment of Chemotherapy-Induced Peripheral Neuropathy (CIPN)

Hayden, Ashley, Hu, Peter, Newsham, Irene, Abdi, Salahadin

Journal:

Cancer Genetics

Année:

2018

Fichier:

PDF, 51 KB

2018

41

40. Genomic profiling of lung adenocarcinomas with increased MET copy numbers

Liu, Ching-Hua (Ruby), Chen, Hui, Fang, Lianghua, Hu, Peter C., Gu, Jun, Zhao, Jin, Abraham, Ronald, Yao, Hui, Singh, Rajesh R., Jeffrey Medeiros, L., Luthra, Rajyalakshimi, Lu, Xinyan

Journal:

Cancer Genetics

Année:

2018

Fichier:

PDF, 57 KB

2018

42

41. Impact of chromosome aberrations on tumor recurrence risk in grade I–II pilocytic astrocytoma

Cooley, Linda, Smith, Scott, Warren, Lisa, Gener, Melissa, Ginn, Kevin

Journal:

Cancer Genetics

Année:

2018

Fichier:

PDF, 54 KB

2018

43

43. Evidence-based review of genomic aberrations in pediatric B-Cell Acute Lymphoblastic Leukemia (B-ALL): Progress from Cancer Genomics Consortium (CGC) B-ALL Workgroup

Akkari, Yassmine, Baughn, Linda, Bruyere, Helene, Hagelstrom, Tanner, Kanagal-Shamanna, Rashmi, Luo, Minjie, Mikhail, Fady M., Pitel, Beth, Raca, Gordana, Shago, Mary, Shao, Lina, Smith, Lisa R., Smol

Journal:

Cancer Genetics

Année:

2018

Fichier:

PDF, 57 KB

2018

44

45. Clinical utility of NGS hemeonc panel in a pediatric patient (pancytopenia concerning for primary myelofibrosis) with KRAS mutation

Dash, Durga, Martin, Paul L., Russel, Thomas Bennett

Journal:

Cancer Genetics

Année:

2018

Fichier:

PDF, 53 KB

2018

45

46. Oncogenic fusion detection by next-generation sequencing

Haskell, Gloria, Deak, Kristen, Rehder, Catherine, Rapisardo, Sarah

Journal:

Cancer Genetics

Année:

2018

Fichier:

PDF, 52 KB

2018

46

47. Serendipitous identification of meiotic crossover events in struma ovarii tumors by whole genome SNP microarray analysis

Chaubey, Alka, Fee, Timothy, Henderson, Brittany B., DuPont, Barbara R., Stevenson, Roger E.

Journal:

Cancer Genetics

Année:

2018

Fichier:

PDF, 90 KB

2018

47

48. Validation of a targeted-amplicon ion semiconductor sequencing assay for myeloid malignancies

Ferrone, Christina, Werunga, Barnaba, Snetsinger, Brooke, Zhang, Xiao, Feilotter, Harriet, Carson, Nancy, Rauh, Michael

Journal:

Cancer Genetics

Année:

2018

Fichier:

PDF, 54 KB

2018

48

50. Evaluation of SLIMamp NGS cancer panel using clinical FFPE cancer specimens

Atkinson, Aaron, Al-Turkmani, M. Rabie, Schenk, Desiree, Deharvengt, Sophie, Tsongalis, Greg, Lefferts, Joel

Journal:

Cancer Genetics

Année:

2018

Fichier:

PDF, 90 KB

2018

49

51. Molecular characterizations of a novel ATM-LINC00371 rearrangement in chronic lymphocytic leukemia and a novel ATM-USP28 rearrangement in T-prolymphocytic leukemia

Kanagal-Shamanna, Rashmi, Kearney, Hutton, Smoley, Stephanie, Patel, Keyur, Luthra, Rajyalakshmi, Lu, Xinyan

Journal:

Cancer Genetics

Année:

2018

Fichier:

PDF, 52 KB

2018

50

52. Multiplex paired tumor-normal sequencing analysis with discordant sequence-based patient identifiers in stem cell transplant patients

Chen, Hui, Routbort, Mark, Yemelyanova, Anna, Patel, Keyur, Manekia, Jawad, Broaddus, Russell, Luthra, Rajyalakshmi

Journal:

Cancer Genetics

Année:

2018

Fichier:

PDF, 77 KB

2018

51

53. Clinical utility of single-gene ultra-deep coverage NGS assay for TP53 mutations for detection of low-level mutations

Kanagal-Shamanna, Rashmi, Mehrotra, Meenakshi, Bedia Barkoh,, Mallampati, Saradhi, Bolivar, Ana Maria, Chen, Wei, Routbort, Mark, Patel, Keyur, Medeiros, L. Jeffrey, Luthra, Rajyalakshmi

Journal:

Cancer Genetics

Année:

2018

Fichier:

PDF, 38 KB

2018

52

39. Implementation of an NGS-based sequencing and gene fusion panel for routine clinical screening of patients with suspected hematologic malignancies: A genotype-first approach

Sadikovic, Bekim

Journal:

Cancer Genetics

Année:

2018

Langue:

english

Fichier:

PDF, 87 KB

english, 2018

53

23. Low-coverage whole genome sequencing revealed a deletion on chromosome 17p, carrying TP53 , that suggests poor survival in stage III colorectal cancer

Van Hummelen, Paul, Xia, Li Charlie, Lee, HoJoon, Kubit, Matthew, Bouwens, Christina Wood, Shin, GiWon, Greer, Stephanie, Bell, John, Grimes, Sue, Lau, Billy, Johnson, Lucas, Andor, Noemi, Day, Kennet

Journal:

Cancer Genetics

Année:

2018

Langue:

english

Fichier:

PDF, 84 KB

english, 2018

54

26. pVACtools: Computational selection and visualization of neoantigens for personalized cancer vaccine design

Kiwala, Susanna, Hundal, Jasreet, McMichael, Joshua, Feng, Yang-Yang, Miller, Christopher A., Graubert, Aaron, Wollam, Amber, Liu, Connor, Neichin, Jonas, Neveau, Megan, Walker, Jason, Mardis, Elaine

Journal:

Cancer Genetics

Année:

2018

Langue:

english

Fichier:

PDF, 83 KB

english, 2018

55

1. Clinical utility of mate pair sequencing to detect diagnostic and prognostic chromosomal rearrangements and copy number changes in patients with acute myeloid leukemia

Baughn, Linda, Smoley, Stephanie, Pitel, Beth, Vasmatzis, George, Johnson, Sarah, Smadbeck, James, Peterson, Jess, Van Dyke, Daniel, Ketterling, Rhett, Jenkins, Robert, Hoppman, Nicole, Kearney, Hutto

Journal:

Cancer Genetics

Année:

2018

Langue:

english

Fichier:

PDF, 119 KB

english, 2018

56

2. Distinct genetic signature of a high risk AML subgroup with ERG amplification

Znoyko, Iya, Schandl, Cynthia, Wolff, Daynna

Journal:

Cancer Genetics

Année:

2018

Langue:

english

Fichier:

PDF, 148 KB

english, 2018

57

3. Building risk scores for evaluating survival after hematopoietic cell transplantation for AML using pre-transplant cytogenetic data

Li, Yi, Gooley, Ted, Davis, Chris, Silgard, Emily, Sorror, Mohamed L., Ueda, Masumi, Nyland, Jennifer E., Zhao, Lue, Fang, Min

Journal:

Cancer Genetics

Année:

2018

Langue:

english

Fichier:

PDF, 47 KB

english, 2018

58

4. Coordinating variant interpretation knowledgebases improves clinical interpretation of genomic variants in cancers

Wagner, Alex, Walsh, Brian, Sonkin, Dmitriy, Dienstmann, Rodrigo, Li, Xuan Shirley, Beckmann, Jacques S., Mayfield, Georgia, Tamborero, David, Lopez-Bigas, Nuria, Goecks, Jeremy, Margolin, Adam, Griff

Journal:

Cancer Genetics

Année:

2018

Langue:

english

Fichier:

PDF, 47 KB

english, 2018

59

6. Human ring chromosome registry: Developing an interactive web resource for constitutional and cancer cytogenomic diagnosis

Li, Peining, DiAdamo, Autumn, Grommisch, Brittany, Chai, Hongyan, Hu, Qiping

Journal:

Cancer Genetics

Année:

2018

Langue:

english

Fichier:

PDF, 41 KB

english, 2018

60

8. A comparative analysis of reimbursement for molecular pathology testing for neoplasia

Chiu, Melissa, Kroeger, Kathleen, Qu, Xiaoyu, Fang, Min

Journal:

Cancer Genetics

Année:

2018

Langue:

english

Fichier:

PDF, 42 KB

english, 2018

61

9. Integrating clinical microarray analyses in the myeloma diagnostic workup: Rationale for improving patient care with precision medicine while reducing overall cost of testing

Murata-Collins, Joyce, Padeganeh, Abbas

Journal:

Cancer Genetics

Année:

2018

Langue:

english

Fichier:

PDF, 43 KB

english, 2018

62

10. Comprehensive genomic characterization of pediatric B-ALL

Luo, Minjie, Lin, Fumin, Zhao, Xiaonan, Tang, Junxia, Akgumus, Gozde T., Gallo, Daniel J., Romasko, Edward, Gleason, Adam G., Surrey, Lea F., Wertheim, Gerald, Li, Marilyn M.

Journal:

Cancer Genetics

Année:

2018

Langue:

english

Fichier:

PDF, 68 KB

english, 2018

63

13. Clinical application of whole-genome arrays in diagnostic studies of pediatric solid tumors

Shao, Lina, Heider, Amer, Koschmann, Carl, Camelo-Piragua, Sandra, Rabah, Raja

Journal:

Cancer Genetics

Année:

2018

Langue:

english

Fichier:

PDF, 73 KB

english, 2018

64

17. Application of next-generation sequencing in diagnosis of patients with MDS and AML

Li, Jing, Hao, Jinxia, Li, Juan, Wu, Di, Zhang, Mei

Journal:

Cancer Genetics

Année:

2018

Langue:

english

Fichier:

PDF, 50 KB

english, 2018

65

19. Evidence-based review of genomic aberrations in T-ALL: Strategy and progress of CGC T-ALL Working Group

Akkari, Yassmine, Baugn, Linda, Bruyere, Helene, Hagelstrom, Tanner, Pitel, Beth, Raca, Gordana, Smolarek, Teresa, Yenamandra, Ashwini, Meredith, Matthew

Journal:

Cancer Genetics

Année:

2018

Langue:

english

Fichier:

PDF, 46 KB

english, 2018

66

20. Current concepts in breast cancer genomics: An evidence based review from the Cancer Genomics Consortium (CGC) Breast Cancer Workgroup

Geiersbach, Katherine, Liu, Yajuan, Haskell, Gloria, Chen, Hui, Lu, Xinyan, Swisshlem, Karen, Emmadi, Rajyasree, Fang, Min

Journal:

Cancer Genetics

Année:

2018

Langue:

english

Fichier:

PDF, 82 KB

english, 2018

67

21. Cancer curation in the clinical genome resource (on behalf of the ClinGen Somatic Working Group)

Raca, Gordana, Ritter, Deborah, Micheel, Christine, Sonkin, Dmitriy, McCoy, Matthew, McGarvey, Peter, Rao, Shruti, Li, Marilyn, Griffith, Malachi, Griffith, Obi, Roy, Angshumoy, Kulkarni, Shashikant,

Journal:

Cancer Genetics

Année:

2018

Langue:

english

Fichier:

PDF, 54 KB

english, 2018

68

22. Clinical utility of integrated genomic profiling in pediatric brain tumor

Lin, Fumin, Chang, Fengqi, Surrey, Lea, Akgumus, Gozde, Gallo, Daniel, Cao, Kajia, Santi, Mariarita, Waanders, Angela, Li, Marilyn

Journal:

Cancer Genetics

Année:

2018

Langue:

english

Fichier:

PDF, 54 KB

english, 2018

69

24. Integrated analysis and clinical interpretation of CNV, LOH, and sequence variants of FFPE cancer samples profiled on a solid tumor NGS panel

Murray, Sarah, Verma, Shalini, Keshavan, Raja, Shams, Soheil

Journal:

Cancer Genetics

Année:

2018

Langue:

english

Fichier:

PDF, 49 KB

english, 2018

70

27. Biomarker driven clinical trial curation and search

LeNoue-Newton, Michele, Jain, Neha, Anderson, Ingrid, Micheel, Christine, Levy, Mia

Journal:

Cancer Genetics

Année:

2018

Langue:

english

Fichier:

PDF, 49 KB

english, 2018

71

28. Creation, maintenance, and utility of a comprehensive and informative pan-cancer gene list to aid in interpretation of whole genomes in cancer

Pitel, Beth A., Gliem, Troy J., Knight, Shannon M., Zysk, Christopher D., Kipp, Benjamin R., Geiersbach, Katherine B., Greipp, Patricia T., Kearney, Hutton M., Baughn, Linda B.

Journal:

Cancer Genetics

Année:

2018

Langue:

english

Fichier:

PDF, 87 KB

english, 2018

72

29. Integrating ClinGen somatic cancer variant description standards into crowdsourced curation technology via CIViC database for ClinVar submission

Danos, Arpad, Ritter, Deborah, Krysiak, Kilannin, Sonkin, Dmitriy, Micheel, Christine, McCoy, Matthew, Rao, Shruti, Raca, Gordana, Boca, Simina, Roy, Angshumoy, Sidiropoulos, Nikoletta, Aisner, Dara,

Journal:

Cancer Genetics

Année:

2018

Langue:

english

Fichier:

PDF, 54 KB

english, 2018

73

30. Clinical utility of NGS in the understanding of crosstalk between nuclear cancer genes and mitochondrial genome in tumorigenesis

Zhao, Pei, Wang, Hao, Dai, Hong-Zheng, Yang, Tzu-Wei, Wong, Lee-Jun

Journal:

Cancer Genetics

Année:

2018

Langue:

english

Fichier:

PDF, 53 KB

english, 2018

74

31. Transcriptional alterations to blood monocytes in breast cancer reveal down regulation of anti-cancer pathways

Robinson, Amy, Skola, Dylan, Cassetta, Luca, Bain, Calum, Louwe, Peter, Lynch, Ruairi, Jenkins, Steve, Glass, Chris, Pollard, Jeff

Journal:

Cancer Genetics

Année:

2018

Langue:

english

Fichier:

PDF, 84 KB

english, 2018

75

33. Chromosomal abnormalities detected in clinical CMA testing of atypical melanocytic proliferations

Hughes, Edward, Johnston, Michael, Linos, Konstantinos, LeBlanc, Robert, Lefferts, Joel

Journal:

Cancer Genetics

Année:

2018

Langue:

english

Fichier:

PDF, 80 KB

english, 2018

76

34. Genome-wide mosaicism, chimerism, and contamination: Recognizing and interpreting genotyping patterns from SNP arrays

Conlin, Laura K., Luo, Minjie, Weckselblatt, Brooke, Rafferty, Kelly A., Kalish, Jennifer, Zackai, Elaine H., Dulik, Matthew A., Spinner, Nancy B.

Journal:

Cancer Genetics

Année:

2018

Langue:

english

Fichier:

PDF, 48 KB

english, 2018

77

35. PLOIDY and the array

Hauenstein, Jennifer, Liebenberg, Adrianna, Matthews, Beth, O'Hare, Cynthia, Thompson, Kim, Gramlich, Christina Fox, Sheff, Faith, Vigo, Enrique, Phillips, Carol, Williams, Jean, Deeb, Kristin, Neill,

Journal:

Cancer Genetics

Année:

2018

Langue:

english

Fichier:

PDF, 48 KB

english, 2018

78

36. FDA approved versus laboratory developed test: An exercise in comparisons utilizing UroVysion evaluation for bladder cancer

From, Christopher, Donovan, Christine, Stampalia, Ann, Morgan, Catherine, Wang, Sharon, Staley, Rong, Disteche, Christine, Liu, Yajuan, Fang, Min

Journal:

Cancer Genetics

Année:

2018

Langue:

english

Fichier:

PDF, 84 KB

english, 2018

79

37. Clinical validation of somatic alterations in solid tumors by next generation sequencing

Li, Xia, Austin, Bryan, Donovan, Michael, Orton, Janet, Liu, Guang

Journal:

Cancer Genetics

Année:

2018

Langue:

english

Fichier:

PDF, 50 KB

english, 2018

80

38. The role of CYP2D6 Single Nucleotide Polymorphism (SNP) for the prediction and treatment of Chemotherapy-Induced Peripheral Neuropathy (CIPN)

Hayden, Ashley, Hu, Peter, Newsham, Irene, Abdi, Salahadin

Journal:

Cancer Genetics

Année:

2018

Langue:

english

Fichier:

PDF, 51 KB

english, 2018

81

40. Genomic profiling of lung adenocarcinomas with increased MET copy numbers

Liu, Ching-Hua (Ruby), Chen, Hui, Fang, Lianghua, Hu, Peter C., Gu, Jun, Zhao, Jin, Abraham, Ronald, Yao, Hui, Singh, Rajesh R., Jeffrey Medeiros, L., Luthra, Rajyalakshimi, Lu, Xinyan

Journal:

Cancer Genetics

Année:

2018

Langue:

english

Fichier:

PDF, 57 KB

english, 2018

82

41. Impact of chromosome aberrations on tumor recurrence risk in grade I–II pilocytic astrocytoma

Cooley, Linda, Smith, Scott, Warren, Lisa, Gener, Melissa, Ginn, Kevin

Journal:

Cancer Genetics

Année:

2018

Langue:

english

Fichier:

PDF, 54 KB

english, 2018

83

43. Evidence-based review of genomic aberrations in pediatric B-Cell Acute Lymphoblastic Leukemia (B-ALL): Progress from Cancer Genomics Consortium (CGC) B-ALL Workgroup

Akkari, Yassmine, Baughn, Linda, Bruyere, Helene, Hagelstrom, Tanner, Kanagal-Shamanna, Rashmi, Luo, Minjie, Mikhail, Fady M., Pitel, Beth, Raca, Gordana, Shago, Mary, Shao, Lina, Smith, Lisa R., Smol

Journal:

Cancer Genetics

Année:

2018

Langue:

english

Fichier:

PDF, 57 KB

english, 2018

84

45. Clinical utility of NGS hemeonc panel in a pediatric patient (pancytopenia concerning for primary myelofibrosis) with KRAS mutation

Dash, Durga, Martin, Paul L., Russel, Thomas Bennett

Journal:

Cancer Genetics

Année:

2018

Langue:

english

Fichier:

PDF, 53 KB

english, 2018

85

46. Oncogenic fusion detection by next-generation sequencing

Haskell, Gloria, Deak, Kristen, Rehder, Catherine, Rapisardo, Sarah

Journal:

Cancer Genetics

Année:

2018

Langue:

english

Fichier:

PDF, 52 KB

english, 2018

86

47. Serendipitous identification of meiotic crossover events in struma ovarii tumors by whole genome SNP microarray analysis

Chaubey, Alka, Fee, Timothy, Henderson, Brittany B., DuPont, Barbara R., Stevenson, Roger E.

Journal:

Cancer Genetics

Année:

2018

Langue:

english

Fichier:

PDF, 90 KB

english, 2018

87

48. Validation of a targeted-amplicon ion semiconductor sequencing assay for myeloid malignancies

Ferrone, Christina, Werunga, Barnaba, Snetsinger, Brooke, Zhang, Xiao, Feilotter, Harriet, Carson, Nancy, Rauh, Michael

Journal:

Cancer Genetics

Année:

2018

Langue:

english

Fichier:

PDF, 54 KB

english, 2018

88

50. Evaluation of SLIMamp NGS cancer panel using clinical FFPE cancer specimens

Atkinson, Aaron, Al-Turkmani, M. Rabie, Schenk, Desiree, Deharvengt, Sophie, Tsongalis, Greg, Lefferts, Joel

Journal:

Cancer Genetics

Année:

2018

Langue:

english

Fichier:

PDF, 90 KB

english, 2018

89

51. Molecular characterizations of a novel ATM-LINC00371 rearrangement in chronic lymphocytic leukemia and a novel ATM-USP28 rearrangement in T-prolymphocytic leukemia

Kanagal-Shamanna, Rashmi, Kearney, Hutton, Smoley, Stephanie, Patel, Keyur, Luthra, Rajyalakshmi, Lu, Xinyan

Journal:

Cancer Genetics

Année:

2018

Langue:

english

Fichier:

PDF, 52 KB

english, 2018

90

52. Multiplex paired tumor-normal sequencing analysis with discordant sequence-based patient identifiers in stem cell transplant patients

Chen, Hui, Routbort, Mark, Yemelyanova, Anna, Patel, Keyur, Manekia, Jawad, Broaddus, Russell, Luthra, Rajyalakshmi

Journal:

Cancer Genetics

Année:

2018

Langue:

english

Fichier:

PDF, 77 KB

english, 2018

91

53. Clinical utility of single-gene ultra-deep coverage NGS assay for TP53 mutations for detection of low-level mutations

Kanagal-Shamanna, Rashmi, Mehrotra, Meenakshi, Bedia Barkoh,, Mallampati, Saradhi, Bolivar, Ana Maria, Chen, Wei, Routbort, Mark, Patel, Keyur, Medeiros, L. Jeffrey, Luthra, Rajyalakshmi

Journal:

Cancer Genetics

Année:

2018

Langue:

english

Fichier:

PDF, 38 KB

english, 2018

92

49. Assessment of breast cancer trial landscape utilizing a structured clinical trial knowledgebase

Jain, Neha, LeNoue-Newton, Michele, Anderson, Ingrid, Micheel, Christine, Levy, Mia

Journal:

Cancer Genetics

Année:

2018

Langue:

english

Fichier:

PDF, 54 KB

english, 2018

93

7. Data and knowledge sharing to improve patient care: The VICC and MCG experience

Anderson, Ingrid, Jain, Neha, LeNoue-Newton, Michele, Micheel, Christine, Levy, Mia

Journal:

Cancer Genetics

Année:

2018

Langue:

english

Fichier:

PDF, 66 KB

english, 2018

94

42. Recurrent copy number variations and their impact on gene expression levels in endometrial serous carcinoma

Toruner, Gokce, Korkut, Anil, Tang, Zhenya, Tang, Guilin, Saglam, Ozlen

Journal:

Cancer Genetics

Année:

2018

Langue:

english

Fichier:

PDF, 93 KB

english, 2018