Volume 18; Issue S16

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BMC Bioinformatics
Volume 18; Issue S16

BMC Bioinformatics

Volume 18; Issue S16

1

2D–EM clustering approach for high-dimensional data through folding feature vectors

Sharma, Alok, Kamola, Piotr J., Tsunoda, Tatsuhiko

Journal:

BMC Bioinformatics

Année:

2017

Langue:

english

Fichier:

PDF, 1.52 MB

english, 2017

2

CoMet: a workflow using contig coverage and composition for binning a metagenomic sample with high precision

Herath, Damayanthi, Tang, Sen-Lin, Tandon, Kshitij, Ackland, David, Halgamuge, Saman Kumara

Journal:

BMC Bioinformatics

Année:

2017

Langue:

english

Fichier:

PDF, 1.19 MB

english, 2017

3

An improved discriminative filter bank selection approach for motor imagery EEG signal classification using mutual information

Kumar, Shiu, Sharma, Alok, Tsunoda, Tatsuhiko

Journal:

BMC Bioinformatics

Année:

2017

Langue:

english

Fichier:

PDF, 1.59 MB

english, 2017

4

Divisive hierarchical maximum likelihood clustering

Sharma, Alok, López, Yosvany, Tsunoda, Tatsuhiko

Journal:

BMC Bioinformatics

Année:

2017

Langue:

english

Fichier:

PDF, 810 KB

english, 2017

5

Automatic plankton image classification combining multiple view features via multiple kernel learning

Zheng, Haiyong, Wang, Ruchen, Yu, Zhibin, Wang, Nan, Gu, Zhaorui, Zheng, Bing

Journal:

BMC Bioinformatics

Année:

2017

Langue:

english

Fichier:

PDF, 3.48 MB

english, 2017

6

Exploration of charge states of balanol analogues acting as ATP-competitive inhibitors in kinases

Hardianto, Ari, Yusuf, Muhammad, Liu, Fei, Ranganathan, Shoba

Journal:

BMC Bioinformatics

Année:

2017

Langue:

english

Fichier:

PDF, 1.09 MB

english, 2017

7

R3D-BLAST2: an improved search tool for similar RNA 3D substructures

Yen, Ching-Yu, Lin, Jian-Cheng, Chen, Kun-Tze, Lu, Chin Lung

Journal:

BMC Bioinformatics

Année:

2017

Langue:

english

Fichier:

PDF, 3.63 MB

english, 2017

8

Pharmacophore anchor models of flaviviral NS3 proteases lead to drug repurposing for DENV infection

Pathak, Nikhil, Lai, Mei-Ling, Chen, Wen-Yu, Hsieh, Betty-Wu, Yu, Guann-Yi, Yang, Jinn-Moon

Journal:

BMC Bioinformatics

Année:

2017

Langue:

english

Fichier:

PDF, 1.92 MB

english, 2017

9

The node-weighted Steiner tree approach to identify elements of cancer-related signaling pathways

Sun, Yahui, Ma, Chenkai, Halgamuge, Saman

Journal:

BMC Bioinformatics

Année:

2017

Langue:

english

Fichier:

PDF, 1.45 MB

english, 2017

10

Identifying term relations cross different gene ontology categories

Peng, Jiajie, Wang, Honggang, Lu, Junya, Hui, Weiwei, Wang, Yadong, Shang, Xuequn

Journal:

BMC Bioinformatics

Année:

2017

Langue:

english

Fichier:

PDF, 1.36 MB

english, 2017

11

Utilizing random Forest QSAR models with optimized parameters for target identification and its application to target-fishing server

Lee, Kyoungyeul, Lee, Minho, Kim, Dongsup

Journal:

BMC Bioinformatics

Année:

2017

Langue:

english

Fichier:

PDF, 1.63 MB

english, 2017

12

Combining agent based-models and virtual screening techniques to predict the best citrus-derived vaccine adjuvants against human papilloma virus

Pennisi, Marzio, Russo, Giulia, Ravalli, Silvia, Pappalardo, Francesco

Journal:

BMC Bioinformatics

Année:

2017

Langue:

english

Fichier:

PDF, 1.02 MB

english, 2017

13

MultiDCoX: Multi-factor analysis of differential co-expression

Liany, Herty, Rajapakse, Jagath C., Karuturi, R. Krishna Murthy

Journal:

BMC Bioinformatics

Année:

2017

Langue:

english

Fichier:

PDF, 1.57 MB

english, 2017

14

Automated classification and characterization of the mitotic spindle following knockdown of a mitosis-related protein

Khushi, Matloob, Dean, Imraan M., Teber, Erdahl T., Chircop, Megan, Arthur, Jonathan W., Flores-Rodriguez, Neftali

Journal:

BMC Bioinformatics

Année:

2017

Langue:

english

Fichier:

PDF, 904 KB

english, 2017

15

Novel human microbe-disease association prediction using network consistency projection

Bao, Wenzheng, Jiang, Zhichao, Huang, De-Shuang

Journal:

BMC Bioinformatics

Année:

2017

Langue:

english

Fichier:

PDF, 669 KB

english, 2017

16

Refine gene functional similarity network based on interaction networks

Tian, Zhen, Guo, Maozu, Wang, Chunyu, Liu, Xiaoyan, Wang, Shiming

Journal:

BMC Bioinformatics

Année:

2017

Langue:

english

Fichier:

PDF, 988 KB

english, 2017

17

A sparse autoencoder-based deep neural network for protein solvent accessibility and contact number prediction

Deng, Lei, Fan, Chao, Zeng, Zhiwen

Journal:

BMC Bioinformatics

Année:

2017

Langue:

english

Fichier:

PDF, 1.67 MB

english, 2017

18

CNN-BLPred: a Convolutional neural network based predictor for β-Lactamases (BL) and their classes

White, Clarence, Ismail, Hamid D., Saigo, Hiroto, KC, Dukka B.

Journal:

BMC Bioinformatics

Année:

2017

Langue:

english

Fichier:

PDF, 846 KB

english, 2017

19

GTZ: a fast compression and cloud transmission tool optimized for FASTQ files

Xing, Yuting, Li, Gen, Wang, Zhenguo, Feng, Bolun, Song, Zhuo, Wu, Chengkun

Journal:

BMC Bioinformatics

Année:

2017

Langue:

english

Fichier:

PDF, 934 KB

english, 2017

20

CORNAS: coverage-dependent RNA-Seq analysis of gene expression data without biological replicates

Low, Joel Z. B., Khang, Tsung Fei, Tammi, Martti T.

Journal:

BMC Bioinformatics

Année:

2017

Langue:

english

Fichier:

PDF, 1.41 MB

english, 2017

21

16SPIP: a comprehensive analysis pipeline for rapid pathogen detection in clinical samples based on 16S metagenomic sequencing

Miao, Jiaojiao, Han, Na, Qiang, Yujun, Zhang, Tingting, Li, Xiuwen, Zhang, Wen

Journal:

BMC Bioinformatics

Année:

2017

Langue:

english

Fichier:

PDF, 573 KB

english, 2017