Volume 45; Issue 11

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Biochemistry
Volume 45; Issue 11

Biochemistry

Volume 45; Issue 11

1

Structural Basis for Sequential Cleavage of Fibrinopeptides upon Fibrin Assembly†,‡

Pechik, Igor, Yakovlev, Sergiy, Mosesson, Michael W., Gilliland, Gary L., Medved, Leonid

Journal:

Année:

2006

Langue:

english

Fichier:

PDF, 558 KB

english, 2006

2

Hydration of the Folding Transition State Ensemble of a Protein †

Brun, Ludovic, Isom, Daniel G., Velu, Priya, García-Moreno, Bertrand, Royer, Catherine Ann

Journal:

Année:

2006

Langue:

english

Fichier:

PDF, 192 KB

english, 2006

3

Efficient Metabolic Engineering of GM3 on Tumor Cells by N -Phenylacetyl- d -mannosamine †

Chefalo, Peter, Pan, Yanbin, Nagy, Nancy, Guo, Zhongwu, Harding, Clifford V.

Journal:

Année:

2006

Langue:

english

Fichier:

PDF, 272 KB

english, 2006

4

Structure of Purine−Purine Mispairs during Misincorporation and Extension by Escherichia coli DNA Polymerase I †

Kretulskie, Angie M., Spratt, Thomas E.

Journal:

Année:

2006

Langue:

english

Fichier:

PDF, 89 KB

english, 2006

5

Novel Tetrapeptide Inhibitors of Bacterial Protein Synthesis Produced by a Streptomyces sp. †

Brandi, Letizia, Lazzarini, Ameriga, Cavaletti, Linda, Abbondi, Monica, Corti, Emiliana, Ciciliato, Ismaela, Gastaldo, Luciano, Marazzi, Alessandra, Feroggio, Marina, Fabbretti, Attilio, Maio, Alessan

Journal:

Année:

2006

Langue:

english

Fichier:

PDF, 183 KB

english, 2006

6

TMAO Promotes Fibrillization and Microtubule Assembly Activity in the C-Terminal Repeat Region of Tau †

Scaramozzino, Francesca, Peterson, Dylan W., Farmer, Patrick, Gerig, J. T., Graves, Donald J., Lew, John

Journal:

Année:

2006

Langue:

english

Fichier:

PDF, 367 KB

english, 2006

7

Structural and Functional Diversities among μ-Conotoxins Targeting TTX-resistant Sodium Channels †

Zhang, Min-Min, Fiedler, Brian, Green, Brad R., Catlin, Phillip, Watkins, Maren, Garrett, James E., Smith, Brian J., Yoshikami, Doju, Olivera, Baldomero M., Bulaj, Grzegorz

Journal:

Année:

2006

Langue:

english

Fichier:

PDF, 253 KB

english, 2006

8

One Functional Switch Mediates Reversible and Irreversible Inactivation of a Herpesvirus Protease †

Nomura, Anson M., Marnett, Alan B., Shimba, Nobuhisa, Dötsch, Volker, Craik, Charles S.

Journal:

Année:

2006

Langue:

english

Fichier:

PDF, 230 KB

english, 2006

9

Identification of Asp 174 and Asp 175 as the Key Catalytic Residues of Human O -GlcNAcase by Functional Analysis of Site-Directed Mutants †

Çetinbaş, Naniye, Macauley, Matthew S., Stubbs, Keith A., Drapala, Robert, Vocadlo, David J.

Journal:

Année:

2006

Langue:

english

Fichier:

PDF, 256 KB

english, 2006

10

Prediction of Folding Rates of Small Proteins: Empirical Relations Based on Length, Secondary Structure Content, Residue Type, and Stability †

Prabhu, N. Prakash, Bhuyan, Abani K.

Journal:

Année:

2006

Langue:

english

Fichier:

PDF, 360 KB

english, 2006

11

Translational Fidelity Mutations in 18S rRNA Affect the Catalytic Activity of Ribosomes and the Oxidative Balance of Yeast Cells †

Konstantinidis, Theodoros C., Patsoukis, Nikolaos, Georgiou, Christos D., Synetos, Dennis

Journal:

Année:

2006

Langue:

english

Fichier:

PDF, 223 KB

english, 2006

12

Sequence-Enabled Reassembly of β-Lactamase (SEER-LAC): A Sensitive Method for the Detection of Double-Stranded DNA †

Ooi, Aik T., Stains, Cliff I., Ghosh, Indraneel, Segal, David J.

Journal:

Année:

2006

Langue:

english

Fichier:

PDF, 325 KB

english, 2006

13

Examination of the Slow Unfolding of Pro-Nerve Growth Factor Argues against a Loop Threading Mechanism for Nerve Growth Factor †

Kliemannel, Marco, Weininger, Ulrich, Balbach, Jochen, Schwarz, Elisabeth, Rudolph, Rainer

Journal:

Année:

2006

Langue:

english

Fichier:

PDF, 198 KB

english, 2006

14

Roles of the Species-Specific Subdomain and the N-Terminal Peptide of Toxoplasma gondii Ferredoxin-NADP + Reductase in Ferredoxin Binding †

Pandini, Vittorio, Caprini, Gianluca, Tedeschi, Gabriella, Seeber, Frank, Zanetti, Giuliana, Aliverti, Alessandro

Journal:

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2006

Langue:

english

Fichier:

PDF, 369 KB

english, 2006

15

Interactions between N- and C-Terminal Domains of the Saccharomyces cerevisiae High-Mobility Group Protein HMO1 Are Required for DNA Bending †

Bauerle, Kevin T., Kamau, Edwin, Grove, Anne

Journal:

Année:

2006

Langue:

english

Fichier:

PDF, 717 KB

english, 2006

16

ERK Modulates DNA Bending and Enhancesome Structure by Phosphorylating HMG1-Boxes 1 and 2 of the RNA Polymerase I Transcription Factor UBF †

Stefanovsky, Victor Y., Langlois, Frédèric, Bazett-Jones, David, Pelletier, Guillaume, Moss, Tom

Journal:

Année:

2006

Langue:

english

Fichier:

PDF, 770 KB

english, 2006

17

The Binding of the PDZ Tandem of Syntenin to Target Proteins †,‡

Grembecka, Jolanta, Cierpicki, Tomasz, Devedjiev, Yancho, Derewenda, Urszula, Kang, Beom Sik, Bushweller, John H., Derewenda, Zygmunt S.

Journal:

Année:

2006

Langue:

english

Fichier:

PDF, 727 KB

english, 2006

18

Fluorescence Energy Transfer Studies of Human Deoxycytidine Kinase: Role of Cysteine 185 in the Conformational Changes that Occur upon Substrate Binding †

Mani, Rajam S., Usova, Elena V., Cass, Carol E., Eriksson, Staffan

Journal:

Année:

2006

Langue:

english

Fichier:

PDF, 116 KB

english, 2006

19

Flexibility and Plasticity of Human Centrin 2 Binding to the Xeroderma Pigmentosum Group C Protein (XPC) from Nuclear Excision Repair †,‡

Yang, Ao, Miron, Simona, Mouawad, Liliane, Duchambon, Patricia, Blouquit, Yves, Craescu, Constantin T.

Journal:

Année:

2006

Langue:

english

Fichier:

PDF, 539 KB

english, 2006

20

Discrimination of Cognate and Noncognate Substrates at the Active Site of Class I Lysyl-tRNA Synthetase †

Wang, Shiming, Ibba, Mette Prætorius-, Ataide, Sandro F., Roy, Hervé

Journal:

Année:

2006

Langue:

english

Fichier:

PDF, 312 KB

english, 2006

21

The Radiomimetic Enediyne C-1027 Induces Unusual DNA Damage Responses to Double-Strand Breaks †

Kennedy, Daniel R., Beerman, Terry A.

Journal:

Année:

2006

Langue:

english

Fichier:

PDF, 269 KB

english, 2006

22

The Crystal Structure of the R52Q Mutant Demonstrates a Role for R52 in Chromophore p K a Regulation in Photoactive Yellow Protein †,‡

Shimizu, Nobutaka, Kamikubo, Hironari, Yamazaki, Yoichi, Imamoto, Yasushi, Kataoka, Mikio

Journal:

Année:

2006

Langue:

english

Fichier:

PDF, 167 KB

english, 2006

23

Metal Ion Dependence, Thermodynamics, and Kinetics for Intramolecular Docking of a GAAA Tetraloop and Receptor Connected by a Flexible Linker †

Downey, Christopher D., Fiore, Julie L., Stoddard, Colby D., Hodak, Jose H., Nesbitt, David J., Pardi, Arthur

Journal:

Année:

2006

Langue:

english

Fichier:

PDF, 371 KB

english, 2006

24

Affinity Labeling of the Rabbit 12/15-Lipoxygenase Using Azido Derivatives of Arachidonic Acid †

Romanov, Stepan, Wiesner, Rainer, Myagkova, Galina, Kuhn, Hartmut, Ivanov, Igor

Journal:

Année:

2006

Langue:

english

Fichier:

PDF, 214 KB

english, 2006

25

Contribution of Structural Peculiarities of Onconase to Its High Stability and Folding Kinetics †

Arnold, Ulrich, Schulenburg, Cindy, Schmidt, Doreen, Ulbrich-Hofmann, Renate

Journal:

Année:

2006

Langue:

english

Fichier:

PDF, 162 KB

english, 2006

26

Spider Egg Case Core Fibers: Trimeric Complexes Assembled from TuSp1, ECP-1, and ECP-2 †

Hu, Xiaoyi, Kohler, Kristin, Falick, Arnold M., Moore, Anne M. F., Jones, Patrick R., Vierra, Craig

Journal:

Année:

2006

Langue:

english

Fichier:

PDF, 480 KB

english, 2006

27

Interaction of the Nucleotide Binding Domains and Regulation of the ATPase Activity of the Human Retina Specific ABC Transporter, ABCR †

Biswas-Fiss, Esther E.

Journal:

Année:

2006

Langue:

english

Fichier:

PDF, 209 KB

english, 2006

28

Escherichia coli Biotin Synthase Produces Selenobiotin. Further Evidence of the Involvement of the [2Fe-2S] 2+ Cluster in the Sulfur Insertion Step †

Tse Sum Bui, Bernadette, Mattioli, Tony A., Florentin, Dominique, Bolbach, Gérard, Marquet, Andrée

Journal:

Année:

2006

Langue:

english

Fichier:

PDF, 151 KB

english, 2006

29

Reconstitution of Blue−Green Reversible Photoconversion of a Cyanobacterial Photoreceptor, PixJ1, in Phycocyanobilin-Producing Escherichia coli †

Yoshihara, Shizue, Shimada, Takashi, Matsuoka, Daisuke, Zikihara, Kazunori, Kohchi, Takayuki, Tokutomi, Satoru

Journal:

Année:

2006

Langue:

english

Fichier:

PDF, 277 KB

english, 2006

30

Inhibition of Skeletal Muscle S1-Myosin ATPase by Peroxynitrite †

Tiago, Teresa, Simão, Sónia, Aureliano, Manuel, Martín-Romero, Francisco Javier, Gutiérrez-Merino, Carlos

Journal:

Année:

2006

Langue:

english

Fichier:

PDF, 354 KB

english, 2006

31

Restoring Full Biological Activity to the Isolated Ectodomain of an Integral Membrane Protein †

Waters, Emily K., Morrissey, James H.

Journal:

Année:

2006

Langue:

english

Fichier:

PDF, 61 KB

english, 2006

32

Ca 2+ Dependency of Calpain 3 (p94) Activation †

García Díaz, Beatriz E., Gauthier, Sherry, Davies, Peter L.

Journal:

Année:

2006

Langue:

english

Fichier:

PDF, 451 KB

english, 2006

33

Light Induced Structural Changes of a Full-length Protein and Its BLUF Domain in YcgF(Blrp), a Blue-Light Sensing Protein That Uses FAD (BLUF) †

Hasegawa, Koji, Masuda, Shinji, Ono, Taka-aki

Journal:

Année:

2006

Langue:

english

Fichier:

PDF, 203 KB

english, 2006

34

Absence of Substrate Channeling between Active Sites in the Agrobacterium tumefaciens IspDF and IspE Enzymes of the Methyl Erythritol Phosphate Pathway †

Lherbet, Christian, Pojer, Florence, Richard, Stéphane B., Noel, Joseph P., Poulter, C. D.

Journal:

Année:

2006

Langue:

english

Fichier:

PDF, 145 KB

english, 2006

35

Modulation of Cell-Cycle Regulatory Signaling Network by 2-Methoxyestradiol in Prostate Cancer Cells Is Mediated through Multiple Signal Transduction Pathways †

Ray, Gibanananda, Dhar, Gopal, Van Veldhuizen, Peter J., Banerjee, Snigdha, Saxena, Neela K., Sengupta, Krishanu, Banerjee, Sushanta K.

Journal:

Année:

2006

Langue:

english

Fichier:

PDF, 610 KB

english, 2006

36

Crystal Structures of Cytochrome c L and Methanol Dehydrogenase from Hyphomicrobium denitrificans : Structural and Mechanistic Insights into Interactions between the Two Proteins †,‡

Nojiri, Masaki, Hira, Daisuke, Yamaguchi, Kazuya, Okajima, Toshihide, Tanizawa, Katsuyuki, Suzuki, Shinnichiro

Journal:

Année:

2006

Langue:

english

Fichier:

PDF, 1.11 MB

english, 2006

37

Biochemical and Pre-Steady-State Kinetic Characterization of the Hepatitis C Virus RNA Polymerase (NS5BΔ21, HC-J4) †

Cramer, Janina, Jaeger, Joachim, Restle, Tobias

Journal:

Année:

2006

Langue:

english

Fichier:

PDF, 213 KB

english, 2006

38

The Cell Penetrating Peptides pVEC and W2-pVEC Induce Transformation of Gel Phase Domains in Phospholipid Bilayers without Affecting Their Integrity †

Herbig, Michael E., Assi, Fabiano, Textor, Marcus, Merkle, Hans P.

Journal:

Année:

2006

Langue:

english

Fichier:

PDF, 1.08 MB

english, 2006

39

The Membrane-Active Regions of the Hepatitis C Virus E1 and E2 Envelope Glycoproteins †

Pérez-Berná, Ana J., Moreno, Miguel R., Guillén, Jaime, Bernabeu, Angela, Villalaín, José

Journal:

Année:

2006

Langue:

english

Fichier:

PDF, 1.08 MB

english, 2006

40

Structural Basis for the Metal-Selective Activation of the Manganese Transport Regulator of Bacillus subtilis †,‡

Kliegman, Joseph I., Griner, Sarah L., Helmann, John D., Brennan, Richard G., Glasfeld, Arthur

Journal:

Année:

2006

Langue:

english

Fichier:

PDF, 476 KB

english, 2006