Volume 42; Issue 17

Main
Biochemistry
Volume 42; Issue 17

Biochemistry

Volume 42; Issue 17

1

Anticodon Sequence Mutants of Escherichia coli Initiator tRNA: Effects of Overproduction of Aminoacyl-tRNA Synthetases, Methionyl-tRNA Formyltransferase, and Initiation Factor 2 on Activity in Initiation†

Mayer, Christine, Köhrer, Caroline, Kenny, Eimear, Prusko, Carsten, RajBhandary, Uttam L.

Journal:

Année:

2003

Langue:

english

Fichier:

PDF, 231 KB

english, 2003

2

Characterization of the Heme Environmental Structure of Cytoglobin, a Fourth Globin in Humans †

Sawai, Hitomi, Kawada, Norifumi, Yoshizato, Katsutoshi, Nakajima, Hiroshi, Aono, Shigetoshi, Shiro, Yoshitsugu

Journal:

Année:

2003

Langue:

english

Fichier:

PDF, 222 KB

english, 2003

3

Stabilization of Proteins by Ligand Binding: Application to Drug Screening and Determination of Unfolding Energetics †

Waldron, Travis T., Murphy, Kenneth P.

Journal:

Année:

2003

Langue:

english

Fichier:

PDF, 155 KB

english, 2003

4

Temperature Range of Thermodynamic Stability for the Native State of Reversible Two-State Proteins †

Kumar, Sandeep, Tsai, Chung Jung, Nussinov, Ruth

Journal:

Année:

2003

Langue:

english

Fichier:

PDF, 297 KB

english, 2003

5

Structure and Energetics of an Allele-Specific Genetic Interaction between dnaJ and dnaK : Correlation of Nuclear Magnetic Resonance Chemical Shift Perturbations in the J-Domain of Hsp40/DnaJ with Binding Affinity for the ATPase Domain of Hsp70/DnaK †

Landry, Samuel J.

Journal:

Année:

2003

Langue:

english

Fichier:

PDF, 183 KB

english, 2003

6

Domain Substructure of HPV E6 Oncoprotein: Biophysical Characterization of the E6 C-Terminal DNA-Binding Domain †

Nominé, Yves, Charbonnier, Sebastian, Ristriani, Tutik, Stier, Gunter, Masson, Murielle, Cavusoglu, Nukhet, Van Dorsselaer, Alain, Weiss, Étienne, Kieffer, Bruno, Travé, Gilles

Journal:

Année:

2003

Langue:

english

Fichier:

PDF, 183 KB

english, 2003

7

The Carboxyl-Terminal Region Common to Lamins A and C Contains a DNA Binding Domain †

Stierlé, Vérène, Couprie, Joël, Östlund, Cecilia, Krimm, Isabelle, Zinn-Justin, Sophie, Hossenlopp, Paul, Worman, Howard J., Courvalin, Jean-Claude, Duband-Goulet, Isabelle

Journal:

Année:

2003

Langue:

english

Fichier:

PDF, 297 KB

english, 2003

8

A-Tract Polarity Dominate the Curvature in Flanking Sequences †

Merling, Ayelet, Sagaydakova, Nataliya, Haran, Tali E.

Journal:

Année:

2003

Langue:

english

Fichier:

PDF, 96 KB

english, 2003

9

Peptidyl Aldehydes as Reversible Covalent Inhibitors of Src Homology 2 Domains †

Park, Junguk, Fu, Hua, Pei, Dehua

Journal:

Année:

2003

Langue:

english

Fichier:

PDF, 161 KB

english, 2003

10

High-Resolution X-Ray Structure of Isoaspartyl Dipeptidase from Escherichia coli †,‡

Thoden, James B., Marti-Arbona, Ricardo, Raushel, Frank M., Holden, Hazel M.

Journal:

Année:

2003

Langue:

english

Fichier:

PDF, 652 KB

english, 2003

11

Thermodynamic and Kinetic Analysis of a Peptide−Class I MHC Interaction Highlights the Noncovalent Nature and Conformational Dynamics of the Class I Heterotrimer †

Binz, Anne-Kathrin, Rodriguez, Rene C., Biddison, William E., Baker, Brian M.

Journal:

Année:

2003

Langue:

english

Fichier:

PDF, 143 KB

english, 2003

12

Role of Charges on Cytochrome f from the Cyanobacterium Phormidium laminosum in Its Interaction with Plastocyanin †

Hart, Sarah E., Schlarb-Ridley, Beatrix G., Delon, Christine, Bendall, Derek S., Howe, Christopher J.

Journal:

Année:

2003

Langue:

english

Fichier:

PDF, 544 KB

english, 2003

13

Interactions among the Three Structural Motifs of the C-Terminal Region of Human Thrombospondin-2

Misenheimer, Tina M., Hannah, Blue-leaf A., Annis, Douglas S., Mosher, Deane F.

Journal:

Année:

2003

Langue:

english

Fichier:

PDF, 178 KB

english, 2003

14

pH Dependence of the Reduction of Dioxygen to Water by Cytochrome c Oxidase. 2. Branched Electron Transfer Pathways Linked by Proton Transfer †

Szundi, Istvan, Van Eps, Ned, Einarsdóttir, Ólöf

Journal:

Année:

2003

Langue:

english

Fichier:

PDF, 321 KB

english, 2003

15

Systematic and Quantitative Analysis of Protein−Protein Recognition between Nonribosomal Peptide Synthetases Investigated in the Tyrocidine Biosynthetic Template †

Linne, Uwe, Stein, Daniel B., Mootz, Henning D., Marahiel, Mohamed A.

Journal:

Année:

2003

Langue:

english

Fichier:

PDF, 296 KB

english, 2003

16

Determinants of DNA Bending in the DNA−Cyclic AMP Receptor Protein Complexes in Escherichia coli †

Lin, Shwu-Hwa, Lee, J. Ching

Journal:

Année:

2003

Langue:

english

Fichier:

PDF, 162 KB

english, 2003

17

Mutational Analysis of an RNA Internal Loop as a Reactivity Epitope for Escherichia coli Ribonuclease III Substrates †

Calin-Jageman, Irina, Nicholson, Allen W.

Journal:

Année:

2003

Langue:

english

Fichier:

PDF, 235 KB

english, 2003

18

Site-Directed Sulfhydryl Labeling of Helix IX in the Lactose Permease of Escherichia coli †

Zhang, Wei, Hu, Yonglin, Kaback, H. Ronald

Journal:

Année:

2003

Langue:

english

Fichier:

PDF, 198 KB

english, 2003

19

Two Intermediates Appear on the Lumirhodopsin Time Scale after Rhodopsin Photoexcitation †

Szundi, Istvan, Lewis, James W., Kliger, David S.

Journal:

Année:

2003

Langue:

english

Fichier:

PDF, 139 KB

english, 2003

20

pH Dependence of the Reduction of Dioxygen to Water by Cytochrome c Oxidase. 1. The P R State Is a pH-Dependent Mixture of Three Intermediates, A , P , and F †

Van Eps, Ned, Szundi, Istvan, Einarsdóttir, Ólöf

Journal:

Année:

2003

Langue:

english

Fichier:

PDF, 210 KB

english, 2003

21

A Bis-Alkylating Triplex Forming Oligonucleotide Inhibits Intracellular Reporter Gene Expression and Prevents Triplex Unwinding Due to Helicase Activity †

Ziemba, Amy J., Reed, Michael W., Raney, Kevin D., Byrd, Alicia B., Ebbinghaus, Scot W.

Journal:

Année:

2003

Langue:

english

Fichier:

PDF, 325 KB

english, 2003

22

Physiologically Relevant Metal Cofactor for Methionine Aminopeptidase-2 Is Manganese

Wang, Jieyi, Sheppard, George S., Lou, Pingping, Kawai, Megumi, Park, Chang, Egan, David A., Schneider, Andrew, Bouska, Jennifer, Lesniewski, Rick, Henkin, Jack

Journal:

Année:

2003

Langue:

english

Fichier:

PDF, 220 KB

english, 2003

23

Characterization of Single-Tryptophan Mutants of Histidine-Containing Phosphocarrier Protein: Evidence for Local Rearrangements during Folding from High Concentrations of Denaturant †

Azuaga, Ana I., Canet, Denis, Smeenk, Gerard, Berends, Roel, Titgemeijer, Fritz, Duurkens, Ria, Mateo, Pedro L., Scheek, Ruud M., Robillard, George T., Dobson, Christopher M., van Nuland, Nico A. J.

Journal:

Année:

2003

Langue:

english

Fichier:

PDF, 340 KB

english, 2003

24

Mammalian 5-Formyluracil−DNA Glycosylase. 2. Role of SMUG1 Uracil−DNA Glycosylase in Repair of 5-Formyluracil and Other Oxidized and Deaminated Base Lesions †

Masaoka, Aya, Matsubara, Mayumi, Hasegawa, Rei, Tanaka, Tamon, Kurisu, Satofumi, Terato, Hiroaki, Ohyama, Yoshihiko, Karino, Naoko, Matsuda, Akira, Ide, Hiroshi

Journal:

Année:

2003

Langue:

english

Fichier:

PDF, 309 KB

english, 2003

25

Positional Isotope Exchange Analysis of the Pantothenate Synthetase Reaction †

Williams, LaKenya, Zheng, Renjian, Blanchard, John S., Raushel, Frank M.

Journal:

Année:

2003

Langue:

english

Fichier:

PDF, 86 KB

english, 2003

26

Identification of an Inhibitor Binding Site of Poly(ADP-ribose) Glycohydrolase †

Koh, David W., Patel, Chandra N., Ramsinghani, Sushma, Slama, James T., Oliveira, Marcos A., Jacobson, Myron K.

Journal:

Année:

2003

Langue:

english

Fichier:

PDF, 199 KB

english, 2003

27

Accuracy and Precision of a New H/D Exchange- and Mass Spectrometry-Based Technique for Measuring the Thermodynamic Properties of Protein−Peptide Complexes

Powell, Kendall D., Fitzgerald, Michael C.

Journal:

Année:

2003

Langue:

english

Fichier:

PDF, 121 KB

english, 2003

28

His1205 and His1223 Are Essential for the Activity of the Mitogenic Pasteurella multocida Toxin †

Orth, Joachim H. C., Blöcker, Dagmar, Aktories, Klaus

Journal:

Année:

2003

Langue:

english

Fichier:

PDF, 172 KB

english, 2003

29

Mammalian 5-Formyluracil−DNA Glycosylase. 1. Identification and Characterization of a Novel Activity That Releases 5-Formyluracil from DNA †

Matsubara, Mayumi, Masaoka, Aya, Tanaka, Tamon, Miyano, Takayuki, Kato, Nagisa, Terato, Hiroaki, Ohyama, Yoshihiko, Iwai, Shigenori, Ide, Hiroshi

Journal:

Année:

2003

Langue:

english

Fichier:

PDF, 192 KB

english, 2003

30

Multiple Hydrogen Kinetic Isotope Effects for Enzymes Catalyzing Exchange with Solvent: Application to Alanine Racemase

Spies, M. Ashley, Toney, Michael D.

Journal:

Année:

2003

Langue:

english

Fichier:

PDF, 173 KB

english, 2003

31

RAR Antagonists Diminish the Level of DNA Binding by the RAR/RXR Heterodimer †

Poujol, Nicolas, Margeat, Emmanuel, Baud, Stephanie, Royer, Catherine A.

Journal:

Année:

2003

Langue:

english

Fichier:

PDF, 90 KB

english, 2003

32

Artificial Site-Specific DNA-Nicking System Based on Common Restriction Enzymes Assisted by PNA Openers †

Kuhn, Heiko, Hu, Yongbo, Frank-Kamenetskii, Maxim D., Demidov, Vadim V.

Journal:

Année:

2003

Langue:

english

Fichier:

PDF, 155 KB

english, 2003

33

Photoactive Yellow Protein: A Prototypic PAS Domain Sensory Protein and Development of a Common Signaling Mechanism †

Cusanovich, Michael A., Meyer, Terry E.

Journal:

Année:

2003

Langue:

english

Fichier:

PDF, 876 KB

english, 2003

34

Binding of NAP-22, a Calmodulin-Binding Neuronal Protein, to Raft-like Domains in Model Membranes †

Khan, Tapan K., Yang, Bing, Thompson, Nancy L., Maekawa, Shohei, Epand, Richard M., Jacobson, Ken

Journal:

Année:

2003

Langue:

english

Fichier:

PDF, 1.02 MB

english, 2003

35

Quantity and Quality Control of Gastric Proton Pump in the Endoplasmic Reticulum by Ubiquitin/Proteasome System †

Kimura, Tohru, Ishizuka, Hokara, Yoshida, Ayumi, Morii, Magotoshi, Takeguchi, Noriaki, Asano, Shinji

Journal:

Année:

2003

Langue:

english

Fichier:

PDF, 328 KB

english, 2003

36

Irreversible Unfolding of the Neutral pH Form of Influenza Hemagglutinin Demonstrates That It Is Not in a Metastable State †

Epand, Raquel F., Epand, Richard M.

Journal:

Année:

2003

Langue:

english

Fichier:

PDF, 118 KB

english, 2003

37

Structural and Dynamic Characterization of a Neuron-Specific Protein Kinase C Substrate, Neurogranin †

Ran, Xiaoyuan, Miao, Hong-Hua, Sheu, Fwu-Shan, Yang, Daiwen

Journal:

Année:

2003

Langue:

english

Fichier:

PDF, 126 KB

english, 2003

38

Mutagenesis of Subunit N of the Escherichia coli Complex I. Identification of the Initiation Codon and the Sensitivity of Mutants to Decylubiquinone †

Amarneh, Bilal, Vik, Steven B.

Journal:

Année:

2003

Langue:

english

Fichier:

PDF, 337 KB

english, 2003

39

Identification of Lysine 122 and Arginine 196 as Important Functional Residues of Rat CTP:Phosphocholine Cytidylyltransferase Alpha †

Helmink, Beth Ann, Braker, Jay D., Kent, Claudia, Friesen, Jon A.

Journal:

Année:

2003

Langue:

english

Fichier:

PDF, 284 KB

english, 2003

40

The Hydrophobic Pocket Contributes to the Structural Stability of the N-Terminal Coiled Coil of HIV gp41 but Is Not Required for Six-Helix Bundle Formation

Dwyer, John J., Hasan, Aisha, Wilson, Karen L., White, Jonathan M., Matthews, Thomas J., Delmedico, Mary K.

Journal:

Année:

2003

Langue:

english

Fichier:

PDF, 173 KB

english, 2003

41

Mechanistic Insight into 3-Deoxy- d - manno -octulosonate-8-phosphate Synthase and 3-Deoxy- d - arabino- heptulosonate-7-phosphate Synthase Utilizing Phosphorylated Monosaccharide Analogues †

Howe, David L., Sundaram, Appavu K., Wu, Jing, Gatti, Domenico L., Woodard, Ronald W.

Journal:

Année:

2003

Langue:

english

Fichier:

PDF, 397 KB

english, 2003

42

Lipid−Protein Interactions with Cardiac Phospholamban Studied by Spin-Label Electron Spin Resonance †

Arora, Ashish, Williamson, Ian M., Lee, Anthony G., Marsh, Derek

Journal:

Année:

2003

Langue:

english

Fichier:

PDF, 108 KB

english, 2003

43

FeNO Structure in Distal Pocket Mutants of Myoglobin Based on Resonance Raman Spectroscopy †

Coyle, Candace M., Vogel, Kathleen M., Rush, Thomas S., Kozlowski, Pawel M., Williams, Robert, Spiro, Thomas G., Dou, Yi, Ikeda-Saito, Masao, Olson, John S., Zgierski, Marek Z.

Journal:

Année:

2003

Langue:

english

Fichier:

PDF, 211 KB

english, 2003

44

The J-Domain of Hsp40 Couples ATP Hydrolysis to Substrate Capture in Hsp70 †

Wittung-Stafshede, Pernilla, Guidry, Jesse, Horne, B. Erin, Landry, Samuel J.

Journal:

Année:

2003

Langue:

english

Fichier:

PDF, 148 KB

english, 2003

45

FTIR Spectroscopy of the Complex between pharaonis Phoborhodopsin and Its Transducer Protein †

Furutani, Yuji, Sudo, Yuki, Kamo, Naoki, Kandori, Hideki

Journal:

Année:

2003

Langue:

english

Fichier:

PDF, 152 KB

english, 2003

46

Structural Characterization of Hellethionins from Helleborus purpurascens

Milbradt, A. G., Kerek, F., Moroder, L., Renner, C.

Journal:

Année:

2003

Langue:

english

Fichier:

PDF, 12 KB

english, 2003