Volume 37; Issue 5

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Nucleic Acids Research
Volume 37; Issue 5

Nucleic Acids Research

Volume 37; Issue 5

1

Influence of flanking sequence context on the conformational flexibility of aminofluorene-modified dG adduct in dA mismatch DNA duplexes

Jain, N., Meneni, S., Jain, V., Cho, B. P.

Journal:

Nucleic Acids Research

Année:

2009

Langue:

english

Fichier:

PDF, 1.84 MB

english, 2009

2

RAD50 and NBS1 form a stable complex functional in DNA binding and tethering

van der Linden, E., Sanchez, H., Kinoshita, E., Kanaar, R., Wyman, C.

Journal:

Nucleic Acids Research

Année:

2009

Langue:

english

Fichier:

PDF, 5.36 MB

english, 2009

3

Mutants of Taq DNA polymerase resistant to PCR inhibitors allow DNA amplification from whole blood and crude soil samples

Kermekchiev, M. B., Kirilova, L. I., Vail, E. E., Barnes, W. M.

Journal:

Nucleic Acids Research

Année:

2009

Langue:

english

Fichier:

PDF, 2.28 MB

english, 2009

4

Influence of substituent modifications on the binding of 2-amino-1,8-naphthyridines to cytosine opposite an AP site in DNA duplexes: thermodynamic characterization

Sato, Y., Nishizawa, S., Yoshimoto, K., Seino, T., Ichihashi, T., Morita, K., Teramae, N.

Journal:

Nucleic Acids Research

Année:

2009

Langue:

english

Fichier:

PDF, 1.50 MB

english, 2009

5

Gene expression modulation is associated with gene amplification, supernumerary chromosomes and chromosome loss in antimony-resistant Leishmania infantum

Leprohon, P., Legare, D., Raymond, F., Madore, E., Hardiman, G., Corbeil, J., Ouellette, M.

Journal:

Nucleic Acids Research

Année:

2009

Langue:

english

Fichier:

PDF, 7.80 MB

english, 2009

6

Cisplatin induces loop structures and condensation of single DNA molecules

Hou, X.-M., Zhang, X.-H., Wei, K.-J., Ji, C., Dou, S.-X., Wang, W.-C., Li, M., Wang, P.-Y.

Journal:

Nucleic Acids Research

Année:

2009

Langue:

english

Fichier:

PDF, 7.65 MB

english, 2009

7

The effect of the TRF2 N-terminal and TRFH regions on telomeric G-quadruplex structures

Pedroso, I. M., Hayward, W., Fletcher, T. M.

Journal:

Nucleic Acids Research

Année:

2009

Langue:

english

Fichier:

PDF, 828 KB

english, 2009

8

A self-cleaving DNA enzyme modified with amines, guanidines and imidazoles operates independently of divalent metal cations (M2+)

Hollenstein, M., Hipolito, C. J., Lam, C. H., Perrin, D. M.

Journal:

Nucleic Acids Research

Année:

2009

Langue:

english

Fichier:

PDF, 762 KB

english, 2009

9

Nucleic Acids Research: VOLUME 37 ISSUE 5 2009

Journal:

Nucleic Acids Research

Année:

2009

Fichier:

PDF, 312 KB

2009

10

How binding of small molecule and peptide ligands to HIV-1 TAR alters the RNA motional landscape

Bardaro, M. F., Shajani, Z., Patora-Komisarska, K., Robinson, J. A., Varani, G.

Journal:

Nucleic Acids Research

Année:

2009

Langue:

english

Fichier:

PDF, 711 KB

english, 2009

11

JBP1 and JBP2 are two distinct thymidine hydroxylases involved in J biosynthesis in genomic DNA of African trypanosomes

Cliffe, L. J., Kieft, R., Southern, T., Birkeland, S. R., Marshall, M., Sweeney, K., Sabatini, R.

Journal:

Nucleic Acids Research

Année:

2009

Langue:

english

Fichier:

PDF, 1.88 MB

english, 2009

12

Unconventional decoding of the AUA codon as methionine by mitochondrial tRNAMet with the anticodon f5CAU as revealed with a mitochondrial in vitro translation system

Takemoto, C., Spremulli, L. L., Benkowski, L. A., Ueda, T., Yokogawa, T., Watanabe, K.

Journal:

Nucleic Acids Research

Année:

2009

Langue:

english

Fichier:

PDF, 5.29 MB

english, 2009

13

An efficient platform for genetic selection and screening of gene switches in Escherichia coli

Muranaka, N., Sharma, V., Nomura, Y., Yokobayashi, Y.

Journal:

Nucleic Acids Research

Année:

2009

Langue:

english

Fichier:

PDF, 428 KB

english, 2009

14

A rapid simple approach to quantify chromosome conformation capture

Abou El Hassan, M., Bremner, R.

Journal:

Nucleic Acids Research

Année:

2009

Langue:

english

Fichier:

PDF, 9.40 MB

english, 2009

15

Model-based redesign of global transcription regulation

Carrera, J., Rodrigo, G., Jaramillo, A.

Journal:

Nucleic Acids Research

Année:

2009

Langue:

english

Fichier:

PDF, 4.94 MB

english, 2009

16

Non-coding RNA annotation of the genome of Trichoplax adhaerens

Hertel, J., de Jong, D., Marz, M., Rose, D., Tafer, H., Tanzer, A., Schierwater, B., Stadler, P. F.

Journal:

Nucleic Acids Research

Année:

2009

Langue:

english

Fichier:

PDF, 1.04 MB

english, 2009

17

Subscriptions

Journal:

Nucleic Acids Research

Année:

2009

Langue:

english

Fichier:

PDF, 47 KB

english, 2009

18

Selection of complementary single-variable domains for building monoclonal antibodies to native proteins

Tanaka, T., Rabbitts, T. H.

Journal:

Nucleic Acids Research

Année:

2009

Langue:

english

Fichier:

PDF, 1.26 MB

english, 2009

19

Allegro: Analyzing expression and sequence in concert to discover regulatory programs

Halperin, Y., Linhart, C., Ulitsky, I., Shamir, R.

Journal:

Nucleic Acids Research

Année:

2009

Langue:

english

Fichier:

PDF, 11.24 MB

english, 2009

20

Furan-modified oligonucleotides for fast, high-yielding and site-selective DNA inter-strand cross-linking with non-modified complements

Stevens, K., Madder, A.

Journal:

Nucleic Acids Research

Année:

2009

Langue:

english

Fichier:

PDF, 372 KB

english, 2009

21

Modulation of gene expression in U251 glioblastoma cells by binding of mutant p53 R273H to intronic and intergenic sequences

Brazdova, M., Quante, T., Togel, L., Walter, K., Loscher, C., Tichy, V., Cincarova, L., Deppert, W., Tolstonog, G. V.

Journal:

Nucleic Acids Research

Année:

2009

Langue:

english

Fichier:

PDF, 10.57 MB

english, 2009

22

Differential usage of alternate promoters of the human stress response gene ATF3 in stress response and cancer cells

Miyazaki, K., Inoue, S., Yamada, K., Watanabe, M., Liu, Q., Watanabe, T., Adachi, M. T., Tanaka, Y., Kitajima, S.

Journal:

Nucleic Acids Research

Année:

2009

Langue:

english

Fichier:

PDF, 3.29 MB

english, 2009

23

Genetic screening for modifiers of the DREF pathway in Drosophila melanogaster: identification and characterization of HP6 as a novel target of DREF

Ida, H., Suzusho, N., Suyari, O., Yoshida, H., Ohno, K., Hirose, F., Itoh, M., Yamaguchi, M.

Journal:

Nucleic Acids Research

Année:

2009

Langue:

english

Fichier:

PDF, 8.43 MB

english, 2009

24

Integrating sequence with FPC fingerprint maps

Nelson, W., Soderlund, C.

Journal:

Nucleic Acids Research

Année:

2009

Langue:

english

Fichier:

PDF, 2.88 MB

english, 2009

25

A highly conserved cis-regulatory motif directs differential gonadal synexpression of Dmrt1 transcripts during gonad development

Herpin, A., Nakamura, S., Wagner, T. U., Tanaka, M., Schartl, M.

Journal:

Nucleic Acids Research

Année:

2009

Langue:

english

Fichier:

PDF, 15.17 MB

english, 2009

26

RNA structure prediction from evolutionary patterns of nucleotide composition

Smit, S., Knight, R., Heringa, J.

Journal:

Nucleic Acids Research

Année:

2009

Langue:

english

Fichier:

PDF, 344 KB

english, 2009

27

Generation of single-chain LAGLIDADG homing endonucleases from native homodimeric precursor proteins

Li, H., Pellenz, S., Ulge, U., Stoddard, B. L., Monnat, R. J.

Journal:

Nucleic Acids Research

Année:

2009

Langue:

english

Fichier:

PDF, 7.16 MB

english, 2009

28

Functional links between clustered microRNAs: suppression of cell-cycle inhibitors by microRNA clusters in gastric cancer

Kim, Y.-K., Yu, J., Han, T. S., Park, S.-Y., Namkoong, B., Kim, D. H., Hur, K., Yoo, M.-W., Lee, H.-J., Yang, H.-K., Kim, V. N.

Journal:

Nucleic Acids Research

Année:

2009

Langue:

english

Fichier:

PDF, 9.88 MB

english, 2009

29

Aminoacyl-tRNA recognition by the FemXWv transferase for bacterial cell wall synthesis

Fonvielle, M., Chemama, M., Villet, R., Lecerf, M., Bouhss, A., Valery, J.-M., Etheve-Quelquejeu, M., Arthur, M.

Journal:

Nucleic Acids Research

Année:

2009

Langue:

english

Fichier:

PDF, 243 KB

english, 2009

30

Cooperative activation of the ATR checkpoint kinase by TopBP1 and damaged DNA

Choi, J.-H., Lindsey-Boltz, L. A., Sancar, A.

Journal:

Nucleic Acids Research

Année:

2009

Langue:

english

Fichier:

PDF, 3.02 MB

english, 2009

31

Dissecting the splicing mechanism of the Drosophila editing enzyme; dADAR

Marcucci, R., Romano, M., Feiguin, F., O'Connell, M. A., Baralle, F. E.

Journal:

Nucleic Acids Research

Année:

2009

Langue:

english

Fichier:

PDF, 3.89 MB

english, 2009

32

DNA sampling: a method for probing protein binding at specific loci on bacterial chromosomes

Butala, M., Busby, S. J. W., Lee, D. J.

Journal:

Nucleic Acids Research

Année:

2009

Langue:

english

Fichier:

PDF, 4.36 MB

english, 2009

33

Steady-state levels of imported tRNAs in Chlamydomonas mitochondria are correlated with both cytosolic and mitochondrial codon usages

Vinogradova, E., Salinas, T., Cognat, V., Remacle, C., Marechal-Drouard, L.

Journal:

Nucleic Acids Research

Année:

2009

Langue:

english

Fichier:

PDF, 508 KB

english, 2009

34

Insights into the architecture and stoichiometry of Escherichia coli PepA*DNA complexes involved in transcriptional control and site-specific DNA recombination by atomic force microscopy

Minh, P. N. L., Devroede, N., Massant, J., Maes, D., Charlier, D.

Journal:

Nucleic Acids Research

Année:

2009

Langue:

english

Fichier:

PDF, 7.96 MB

english, 2009

35

Diene-modified nucleotides for the Diels-Alder-mediated functional tagging of DNA

Borsenberger, V., Howorka, S.

Journal:

Nucleic Acids Research

Année:

2009

Langue:

english

Fichier:

PDF, 316 KB

english, 2009

36

Histone H3 Lys79 methylation is required for efficient nucleotide excision repair in a silenced locus of Saccharomyces cerevisiae

Chaudhuri, S., Wyrick, J. J., Smerdon, M. J.

Journal:

Nucleic Acids Research

Année:

2009

Langue:

english

Fichier:

PDF, 7.16 MB

english, 2009

37

DNA models of trinucleotide frameshift deletions: the formation of loops and bulges at the primer-template junction

Baase, W. A., Jose, D., Ponedel, B. C., von Hippel, P. H., Johnson, N. P.

Journal:

Nucleic Acids Research

Année:

2009

Langue:

english

Fichier:

PDF, 190 KB

english, 2009

38

Nucleic Acids Research

Journal:

Nucleic Acids Research

Année:

2009

Langue:

english

Fichier:

PDF, 53 KB

english, 2009