Volume 67; Issue 3

Main
Methods
Volume 67; Issue 3

Methods

Volume 67; Issue 3

1

Effective identification of essential proteins based on priori knowledge, network topology and gene expressions

Li, Min, Zheng, Ruiqing, Zhang, Hanhui, Wang, Jianxin, Pan, Yi

Journal:

Année:

2014

Langue:

english

Fichier:

PDF, 2.13 MB

english, 2014

2

Time-series RNA-seq analysis package (TRAP) and its application to the analysis of rice, Oryza sativa L. ssp. Japonica, upon drought stress

Jo, Kyuri, Kwon, Hawk-Bin, Kim, Sun

Journal:

Année:

2014

Langue:

english

Fichier:

PDF, 1.15 MB

english, 2014

3

Induction of apoptosis through ER stress and TP53 in MCF-7 cells by the nanoparticle [Gd@C82(OH)22]n: A systems biology study

Wang, Lin, Meng, Jie, Cao, Weipeng, Li, Qizhai, Qiu, Yuqing, Sun, Baoyun, Li, Lei M.

Journal:

Année:

2014

Langue:

english

Fichier:

PDF, 2.32 MB

english, 2014

4

Gene Ontology based housekeeping gene selection for RNA-seq normalization

Chen, Chien-Ming, Lu, Yu-Lun, Sio, Chi-Pong, Wu, Guan-Chung, Tzou, Wen-Shyong, Pai, Tun-Wen

Journal:

Année:

2014

Langue:

english

Fichier:

PDF, 1.17 MB

english, 2014

5

Deciphering early development of complex diseases by progressive module network

Zeng, Tao, Zhang, Chuan-chao, Zhang, Wanwei, Liu, Rui, Liu, Juan, Chen, Luonan

Journal:

Année:

2014

Langue:

english

Fichier:

PDF, 2.42 MB

english, 2014

6

Breast cancer patient stratification using a molecular regularized consensus clustering method

Wang, Chao, Machiraju, Raghu, Huang, Kun

Journal:

Année:

2014

Langue:

english

Fichier:

PDF, 1.86 MB

english, 2014

7

Proteome compression via protein domain compositions

Hayashida, Morihiro, Ruan, Peiying, Akutsu, Tatsuya

Journal:

Année:

2014

Langue:

english

Fichier:

PDF, 485 KB

english, 2014

8

Incorporating inter-relationships between different levels of genomic data into cancer clinical outcome prediction

Kim, Dokyoon, Shin, Hyunjung, Sohn, Kyung-Ah, Verma, Anurag, Ritchie, Marylyn D., Kim, Ju Han

Journal:

Année:

2014

Langue:

english

Fichier:

PDF, 2.11 MB

english, 2014

9

Signalling entropy: A novel network-theoretical framework for systems analysis and interpretation of functional omic data

Teschendorff, Andrew E., Sollich, Peter, Kuehn, Reimer

Journal:

Année:

2014

Langue:

english

Fichier:

PDF, 873 KB

english, 2014

10

Model predictive control for optimally scheduling intermittent androgen suppression of prostate cancer

Hirata, Yoshito, Azuma, Shun-ichi, Aihara, Kazuyuki

Journal:

Année:

2014

Langue:

english

Fichier:

PDF, 408 KB

english, 2014

11

Integrative analysis of many RNA-seq datasets to study alternative splicing

Li, Wenyuan, Dai, Chao, Kang, Shuli, Zhou, Xianghong Jasmine

Journal:

Année:

2014

Langue:

english

Fichier:

PDF, 2.04 MB

english, 2014

12

Codon-based encoding for DNA sequence analysis

Jeong, Byeong-Soo, Golam Bari, A.T.M., Rokeya Reaz, Mst., Jeon, Seokhee, Lim, Chae-Gyun, Choi, Ho-Jin

Journal:

Année:

2014

Langue:

english

Fichier:

PDF, 903 KB

english, 2014

13

Literature mining of protein phosphorylation using dependency parse trees

Wang, Mang, Xia, Hong, Sun, Dongdong, Chen, Zhaoxiong, Wang, Minghui, Li, Ao

Journal:

Année:

2014

Langue:

english

Fichier:

PDF, 2.26 MB

english, 2014

14

Imputing missing values for genetic interaction data

Wang, Yishu, Wang, Lin, Yang, Dejie, Deng, Minghua

Journal:

Année:

2014

Langue:

english

Fichier:

PDF, 636 KB

english, 2014

15

Editorial Board

Journal:

Année:

2014

Fichier:

PDF, 28 KB

2014

16

Cover 1

Journal:

Année:

2014

Fichier:

PDF, 1.44 MB

2014

17

Inferring gene regulatory networks by integrating ChIP-seq/chip and transcriptome data via LASSO-type regularization methods

Qin, Jing, Hu, Yaohua, Xu, Feng, Yalamanchili, Hari Krishna, Wang, Junwen

Journal:

Année:

2014

Langue:

english

Fichier:

PDF, 2.05 MB

english, 2014