Volume 67; Issue 1

Main
Methods
Volume 67; Issue 1

Methods

Volume 67; Issue 1

1

Reprint of: Construction of Specific Parallel Amplification of RNA Ends (SPARE) libraries for the systematic identification of plant microRNA processing intermediates

Schapire, Arnaldo L., Bologna, Nicolas G., Moro, Belen, Zhai, Jixian, Meyers, Blake C., Palatnik, Javier F.

Journal:

Année:

2014

Langue:

english

Fichier:

PDF, 817 KB

english, 2014

2

Rapid construction of parallel analysis of RNA end (PARE) libraries for Illumina sequencing

Zhai, Jixian, Arikit, Siwaret, Simon, Stacey A., Kingham, Bruce F., Meyers, Blake C.

Journal:

Année:

2014

Langue:

english

Fichier:

PDF, 1.09 MB

english, 2014

3

Improved genome-wide mapping of uncapped and cleaved transcripts in eukaryotes—GMUCT 2.0

Willmann, Matthew R., Berkowitz, Nathan D., Gregory, Brian D.

Journal:

Année:

2014

Langue:

english

Fichier:

PDF, 1.99 MB

english, 2014

4

Identification and annotation of small RNA genes using ShortStack

Shahid, Saima, Axtell, Michael J.

Journal:

Année:

2014

Langue:

english

Fichier:

PDF, 381 KB

english, 2014

5

In silico to in vivo splicing analysis using splicing code models

Gazzara, Matthew R., Vaquero-Garcia, Jorge, Lynch, Kristen W., Barash, Yoseph

Journal:

Année:

2014

Langue:

english

Fichier:

PDF, 2.59 MB

english, 2014

6

Using machine learning and high-throughput RNA sequencing to classify the precursors of small non-coding RNAs

Ryvkin, Paul, Leung, Yuk Yee, Ungar, Lyle H., Gregory, Brian D., Wang, Li-San

Journal:

Année:

2014

Langue:

english

Fichier:

PDF, 1.55 MB

english, 2014

7

Cover 1

Journal:

Année:

2014

Fichier:

PDF, 1.11 MB

2014

8

Genomic approaches for studying transcriptional and post-transcriptional processes

Gregory, Brian D., Meyers, Blake C.

Journal:

Année:

2014

Langue:

english

Fichier:

PDF, 222 KB

english, 2014

9

High throughput characterizations of poly(A) site choice in plants

Ma, Liuyin, Pati, Pratap Kumar, Liu, Man, Li, Qingshun Q., Hunt, Arthur G.

Journal:

Année:

2014

Langue:

english

Fichier:

PDF, 1.98 MB

english, 2014

10

Editorial Board

Journal:

Année:

2014

Fichier:

PDF, 26 KB

2014

11

A user-friendly chromatographic method to purify small regulatory RNAs

Grentzinger, Thomas, Armenise, Claudia, Pelisson, Alain, Brun, Christine, Mugat, Bruno, Chambeyron, Séverine

Journal:

Année:

2014

Langue:

english

Fichier:

PDF, 2.39 MB

english, 2014

12

BRIC-seq: A genome-wide approach for determining RNA stability in mammalian cells

Imamachi, Naoto, Tani, Hidenori, Mizutani, Rena, Imamura, Katsutoshi, Irie, Takuma, Suzuki, Yutaka, Akimitsu, Nobuyoshi

Journal:

Année:

2014

Langue:

english

Fichier:

PDF, 633 KB

english, 2014

13

Use of Bru-Seq and BruChase-Seq for genome-wide assessment of the synthesis and stability of RNA

Paulsen, Michelle T., Veloso, Artur, Prasad, Jayendra, Bedi, Karan, Ljungman, Emily A., Magnuson, Brian, Wilson, Thomas E., Ljungman, Mats

Journal:

Année:

2014

Langue:

english

Fichier:

PDF, 648 KB

english, 2014

14

Profiling post-transcriptionally networked mRNA subsets using RIP-Chip and RIP-Seq

Jayaseelan, Sabarinath, Doyle, Francis, Tenenbaum, Scott A.

Journal:

Année:

2014

Langue:

english

Fichier:

PDF, 981 KB

english, 2014