Volume 75; Issue 9

Applied and Environmental Microbiology

Volume 75; Issue 9

1

Antimicrobial Properties of a Novel Silver-Silica Nanocomposite Material

Egger, S., Lehmann, R. P., Height, M. J., Loessner, M. J., Schuppler, M.

Journal:

Applied and Environmental Microbiology

Année:

2009

Langue:

english

Fichier:

PDF, 530 KB

english, 2009

2

Pathway and Evolutionary Implications of Diphenylamine Biodegradation by Burkholderia sp. Strain JS667

Shin, K. A., Spain, J. C.

Journal:

Applied and Environmental Microbiology

Année:

2009

Langue:

english

Fichier:

PDF, 2.14 MB

english, 2009

3

DNA as an Adhesin: Bacillus cereus Requires Extracellular DNA To Form Biofilms

Vilain, S., Pretorius, J. M., Theron, J., Brozel, V. S.

Journal:

Applied and Environmental Microbiology

Année:

2009

Langue:

english

Fichier:

PDF, 1.27 MB

english, 2009

4

Discrimination of Viable and Dead Fecal Bacteroidales Bacteria by Quantitative PCR with Propidium Monoazide

Bae, S., Wuertz, S.

Journal:

Applied and Environmental Microbiology

Année:

2009

Langue:

english

Fichier:

PDF, 553 KB

english, 2009

5

Characterization of a New Plasmid-Like Prophage in a Pandemic Vibrio parahaemolyticus O3:K6 Strain

Lan, S.-F., Huang, C.-H., Chang, C.-H., Liao, W.-C., Lin, I-H., Jian, W.-N., Wu, Y.-G., Chen, S.-Y., Wong, H.-c.

Journal:

Applied and Environmental Microbiology

Année:

2009

Langue:

english

Fichier:

PDF, 711 KB

english, 2009

6

Pyrosequencing of the Chaperonin-60 Universal Target as a Tool for Determining Microbial Community Composition

Schellenberg, J., Links, M. G., Hill, J. E., Dumonceaux, T. J., Peters, G. A., Tyler, S., Ball, T. B., Severini, A., Plummer, F. A.

Journal:

Applied and Environmental Microbiology

Année:

2009

Langue:

english

Fichier:

PDF, 1.01 MB

english, 2009

7

Purification, Characterization, and Potential Bacterial Wax Production Role of an NADPH-Dependent Fatty Aldehyde Reductase from Marinobacter aquaeolei VT8

Wahlen, B. D., Oswald, W. S., Seefeldt, L. C., Barney, B. M.

Journal:

Applied and Environmental Microbiology

Année:

2009

Langue:

english

Fichier:

PDF, 449 KB

english, 2009

8

The Ultramicrobacterium "Elusimicrobium minutum" gen. nov., sp. nov., the First Cultivated Representative of the Termite Group 1 Phylum

Geissinger, O., Herlemann, D. P. R., Morschel, E., Maier, U. G., Brune, A.

Journal:

Applied and Environmental Microbiology

Année:

2009

Langue:

english

Fichier:

PDF, 766 KB

english, 2009

9

Global Distribution and Evolution of a Toxinogenic Burkholderia-Rhizopus Symbiosis

Lackner, G., Mobius, N., Scherlach, K., Partida-Martinez, L. P., Winkler, R., Schmitt, I., Hertweck, C.

Journal:

Applied and Environmental Microbiology

Année:

2009

Langue:

english

Fichier:

PDF, 526 KB

english, 2009

10

Mutagenesis of the Bacterial RNA Polymerase Alpha Subunit for Improvement of Complex Phenotypes

Klein-Marcuschamer, D., Santos, C. N. S., Yu, H., Stephanopoulos, G.

Journal:

Applied and Environmental Microbiology

Année:

2009

Langue:

english

Fichier:

PDF, 716 KB

english, 2009

11

Effect of Substrate Concentration on Carbon Isotope Fractionation during Acetoclastic Methanogenesis by Methanosarcina barkeri and M. acetivorans and in Rice Field Soil

Goevert, D., Conrad, R.

Journal:

Applied and Environmental Microbiology

Année:

2009

Langue:

english

Fichier:

PDF, 485 KB

english, 2009

12

Comparison of Planktonic and Biofilm Cultures of Pseudomonas fluorescens DSM 8341 Cells Grown on Fluoroacetate

Heffernan, B., Murphy, C. D., Casey, E.

Journal:

Applied and Environmental Microbiology

Année:

2009

Langue:

english

Fichier:

PDF, 524 KB

english, 2009

13

FvtA Is the Receptor for the Siderophore Vanchrobactin in Vibrio anguillarum: Utility as a Route of Entry for Vanchrobactin Analogues

Balado, M., Osorio, C. R., Lemos, M. L.

Journal:

Applied and Environmental Microbiology

Année:

2009

Langue:

english

Fichier:

PDF, 370 KB

english, 2009

14

Genomic Analysis of "Elusimicrobium minutum," the First Cultivated Representative of the Phylum "Elusimicrobia" (Formerly Termite Group 1)

Herlemann, D. P. R., Geissinger, O., Ikeda-Ohtsubo, W., Kunin, V., Sun, H., Lapidus, A., Hugenholtz, P., Brune, A.

Journal:

Applied and Environmental Microbiology

Année:

2009

Langue:

english

Fichier:

PDF, 815 KB

english, 2009

15

Cloning and Characterization of the Biosynthetic Gene Cluster for Tomaymycin, an SJG-136 Monomeric Analog

Li, W., Chou, S., Khullar, A., Gerratana, B.

Journal:

Applied and Environmental Microbiology

Année:

2009

Langue:

english

Fichier:

PDF, 565 KB

english, 2009

16

Host-Directed Evolution of a Novel Lactate Oxidase in Streptococcus iniae Isolates from Barramundi (Lates calcarifer)

Nawawi, R. A., Baiano, J. C. F., Kvennefors, E. C. E., Barnes, A. C.

Journal:

Applied and Environmental Microbiology

Année:

2009

Langue:

english

Fichier:

PDF, 2.33 MB

english, 2009

17

Reduction of Tumor Necrosis Factor Alpha-Inducing Capacity of Recombinant Lactobacillus casei via Expression of Salmonella OmpC

Kajikawa, A., Igimi, S.

Journal:

Applied and Environmental Microbiology

Année:

2009

Langue:

english

Fichier:

PDF, 909 KB

english, 2009

18

Evaluation of Single-Nucleotide Primer Extension for Detection and Typing of Phylogenetic Markers Used for Investigation of Microbial Communities

Nikolausz, M., Chatzinotas, A., Tancsics, A., Imfeld, G., Kastner, M.

Journal:

Applied and Environmental Microbiology

Année:

2009

Langue:

english

Fichier:

PDF, 1.46 MB

english, 2009

19

Enhanced Secretion of Biologically Active Murine Interleukin-12 by Lactococcus lactis

Fernandez, A., Horn, N., Wegmann, U., Nicoletti, C., Gasson, M. J., Narbad, A.

Journal:

Applied and Environmental Microbiology

Année:

2009

Fichier:

PDF, 18 KB

2009

20

Comparative Genomic Hybridization Analysis of Two Predominant Nordic Group I (Proteolytic) Clostridium botulinum Type B Clusters

Lindstrom, M., Hinderink, K., Somervuo, P., Kiviniemi, K., Nevas, M., Chen, Y., Auvinen, P., Carter, A. T., Mason, D. R., Peck, M. W., Korkeala, H.

Journal:

Applied and Environmental Microbiology

Année:

2009

Langue:

english

Fichier:

PDF, 402 KB

english, 2009

21

Proliferation of Antibiotic-Producing Bacteria and Concomitant Antibiotic Production as the Basis for the Antibiotic Activity of Jordan's Red Soils

Falkinham, J. O., Wall, T. E., Tanner, J. R., Tawaha, K., Alali, F. Q., Li, C., Oberlies, N. H.

Journal:

Applied and Environmental Microbiology

Année:

2009

Langue:

english

Fichier:

PDF, 160 KB

english, 2009

22

Osmoadaptation among Vibrio Species and Unique Genomic Features and Physiological Responses of Vibrio parahaemolyticus

Naughton, L. M., Blumerman, S. L., Carlberg, M., Boyd, E. F.

Journal:

Applied and Environmental Microbiology

Année:

2009

Langue:

english

Fichier:

PDF, 494 KB

english, 2009

23

Development and Application of a Novel Peptide Nucleic Acid Probe for the Specific Detection of Cronobacter Genomospecies (Enterobacter sakazakii) in Powdered Infant Formula

Almeida, C., Azevedo, N. F., Iversen, C., Fanning, S., Keevil, C. W., Vieira, M. J.

Journal:

Applied and Environmental Microbiology

Année:

2009

Langue:

english

Fichier:

PDF, 960 KB

english, 2009

24

Detection of Adenoviruses and Rotaviruses in Drinking Water Sources Used In Rural Areas of Benin, West Africa

Verheyen, J., Timmen-Wego, M., Laudien, R., Boussaad, I., Sen, S., Koc, A., Uesbeck, A., Mazou, F., Pfister, H.

Journal:

Applied and Environmental Microbiology

Année:

2009

Langue:

english

Fichier:

PDF, 143 KB

english, 2009

25

Eukaryotic nirK Genes Encoding Copper-Containing Nitrite Reductase: Originating from the Protomitochondrion?

Kim, S.-W., Fushinobu, S., Zhou, S., Wakagi, T., Shoun, H.

Journal:

Applied and Environmental Microbiology

Année:

2009

Langue:

english

Fichier:

PDF, 1.01 MB

english, 2009

26

Mixed-Species Genomic Microarray Analysis of Fecal Samples Reveals Differential Transcriptional Responses of Bifidobacteria in Breast- and Formula-Fed Infants

Klaassens, E. S., Boesten, R. J., Haarman, M., Knol, J., Schuren, F. H., Vaughan, E. E., de Vos, W. M.

Journal:

Applied and Environmental Microbiology

Année:

2009

Langue:

english

Fichier:

PDF, 350 KB

english, 2009

27

TaqMan Probe-Based Real-Time PCR Assay for Detection and Discrimination of Class I, II, and III tfdA Genes in Soils Treated with Phenoxy Acid Herbicides

Baelum, J., Jacobsen, C. S.

Journal:

Applied and Environmental Microbiology

Année:

2009

Langue:

english

Fichier:

PDF, 809 KB

english, 2009

28

Bacteriophage P22 and Staphylococcus aureus Attenuation on Nonporous Fomites as Determined by Plate Assay and Quantitative PCR

Masago, Y., Shibata, T., Rose, J. B.

Journal:

Applied and Environmental Microbiology

Année:

2009

Fichier:

PDF, 165 KB

2009

29

High Rate of N2 Fixation by East Siberian Cryophilic Soil Bacteria as Determined by Measuring Acetylene Reduction in Nitrogen-Poor Medium Solidified with Gellan Gum

Hara, S., Hashidoko, Y., Desyatkin, R. V., Hatano, R., Tahara, S.

Journal:

Applied and Environmental Microbiology

Année:

2009

Langue:

english

Fichier:

PDF, 431 KB

english, 2009

30

Characterization of a Polycyclic Aromatic Hydrocarbon Degradation Gene Cluster in a Phenanthrene-Degrading Acidovorax Strain

Singleton, D. R., Guzman Ramirez, L., Aitken, M. D.

Journal:

Applied and Environmental Microbiology

Année:

2009

Langue:

english

Fichier:

PDF, 480 KB

english, 2009

31

Generation of Single-Copy Transposon Insertions in Clostridium perfringens by Electroporation of Phage Mu DNA Transposition Complexes

Lanckriet, A., Timbermont, L., Happonen, L. J., Pajunen, M. I., Pasmans, F., Haesebrouck, F., Ducatelle, R., Savilahti, H., Van Immerseel, F.

Journal:

Applied and Environmental Microbiology

Année:

2009

Langue:

english

Fichier:

PDF, 92 KB

english, 2009

32

UV Light Inactivation of Bacterial Biothreat Agents

Rose, L. J., O'Connell, H.

Journal:

Applied and Environmental Microbiology

Année:

2009

Langue:

english

Fichier:

PDF, 106 KB

english, 2009

33

Streptomyces Development in Colonies and Soils

Manteca, A., Sanchez, J.

Journal:

Applied and Environmental Microbiology

Année:

2009

Langue:

english

Fichier:

PDF, 2.57 MB

english, 2009

34

Heterologous Expression of Tulip Petal Plasma Membrane Aquaporins in Pichia pastoris for Water Channel Analysis

Azad, A. K., Sawa, Y., Ishikawa, T., Shibata, H.

Journal:

Applied and Environmental Microbiology

Année:

2009

Langue:

english

Fichier:

PDF, 321 KB

english, 2009

35

Cellobiose Dehydrogenase from the Ligninolytic Basidiomycete Ceriporiopsis subvermispora

Harreither, W., Sygmund, C., Dunhofen, E., Vicuna, R., Haltrich, D., Ludwig, R.

Journal:

Applied and Environmental Microbiology

Année:

2009

Langue:

english

Fichier:

PDF, 431 KB

english, 2009

36

Panel of 23S rRNA Gene-Based Real-Time PCR Assays for Improved Universal and Group-Specific Detection of Phytoplasmas

Hodgetts, J., Boonham, N., Mumford, R., Dickinson, M.

Journal:

Applied and Environmental Microbiology

Année:

2009

Langue:

english

Fichier:

PDF, 65 KB

english, 2009

37

De Novo Biosynthesis of Vanillin in Fission Yeast (Schizosaccharomyces pombe) and Baker's Yeast (Saccharomyces cerevisiae)

Hansen, E. H., Moller, B. L., Kock, G. R., Bunner, C. M., Kristensen, C., Jensen, O. R., Okkels, F. T., Olsen, C. E., Motawia, M. S., Hansen, J.

Journal:

Applied and Environmental Microbiology

Année:

2009

Langue:

english

Fichier:

PDF, 809 KB

english, 2009

38

Characterization of a Dehalobacter Coculture That Dechlorinates 1,2-Dichloroethane to Ethene and Identification of the Putative Reductive Dehalogenase Gene

Grostern, A., Edwards, E. A.

Journal:

Applied and Environmental Microbiology

Année:

2009

Langue:

english

Fichier:

PDF, 1000 KB

english, 2009

39

Rapid Identification of Genes Encoding DNA Polymerases by Function-Based Screening of Metagenomic Libraries Derived from Glacial Ice

Simon, C., Herath, J., Rockstroh, S., Daniel, R.

Journal:

Applied and Environmental Microbiology

Année:

2009

Langue:

english

Fichier:

PDF, 651 KB

english, 2009

40

Glycerol Utilization Gene Cluster in Streptomyces clavuligerus

Banos, S., Perez-Redondo, R., Koekman, B., Liras, P.

Journal:

Applied and Environmental Microbiology

Année:

2009

Langue:

english

Fichier:

PDF, 578 KB

english, 2009

41

Phylogenetic and Chemical Diversity of Three Chemotypes of Bloom-Forming Lyngbya Species (Cyanobacteria: Oscillatoriales) from Reefs of Southeastern Florida

Sharp, K., Arthur, K. E., Gu, L., Ross, C., Harrison, G., Gunasekera, S. P., Meickle, T., Matthew, S., Luesch, H., Thacker, R. W., Sherman, D. H., Paul, V. J.

Journal:

Applied and Environmental Microbiology

Année:

2009

Langue:

english

Fichier:

PDF, 1.19 MB

english, 2009

42

Empirical Testing of 16S rRNA Gene PCR Primer Pairs Reveals Variance in Target Specificity and Efficacy Not Suggested by In Silico Analysis

Morales, S. E., Holben, W. E.

Journal:

Applied and Environmental Microbiology

Année:

2009

Langue:

english

Fichier:

PDF, 306 KB

english, 2009

43

Antibody Recognition Force Microscopy Shows that Outer Membrane Cytochromes OmcA and MtrC Are Expressed on the Exterior Surface of Shewanella oneidensis MR-1

Lower, B. H., Yongsunthon, R., Shi, L., Wildling, L., Gruber, H. J., Wigginton, N. S., Reardon, C. L., Pinchuk, G. E., Droubay, T. C., Boily, J.-F., Lower, S. K.

Journal:

Applied and Environmental Microbiology

Année:

2009

Langue:

english

Fichier:

PDF, 613 KB

english, 2009

44

PCR-Based Method Using Propidium Monoazide To Distinguish Viable from Nonviable Bacillus subtilis Spores

Rawsthorne, H., Dock, C. N., Jaykus, L. A.

Journal:

Applied and Environmental Microbiology

Année:

2009

Langue:

english

Fichier:

PDF, 237 KB

english, 2009

45

Migratory Response of Soil Bacteria to Lyophyllum sp. Strain Karsten in Soil Microcosms

Warmink, J. A., van Elsas, J. D.

Journal:

Applied and Environmental Microbiology

Année:

2009

Langue:

english

Fichier:

PDF, 790 KB

english, 2009

46

Growth of Enterococci in Unaltered, Unseeded Beach Sands Subjected to Tidal Wetting

Yamahara, K. M., Walters, S. P., Boehm, A. B.

Journal:

Applied and Environmental Microbiology

Année:

2009

Fichier:

PDF, 75 KB

2009

47

Influence of a Probiotic Strain of Enterococcus faecium on Salmonella enterica Serovar Typhimurium DT104 Infection in a Porcine Animal Infection Model

Szabo, I., Wieler, L. H., Tedin, K., Scharek-Tedin, L., Taras, D., Hensel, A., Appel, B., Nockler, K.

Journal:

Applied and Environmental Microbiology

Année:

2009

Langue:

english

Fichier:

PDF, 474 KB

english, 2009

48

Quantitative Approach to Determining the Contribution of Viable-but-Nonculturable Subpopulations to Malolactic Fermentation Processes

Quiros, C., Herrero, M., Garcia, L. A., Diaz, M.

Journal:

Applied and Environmental Microbiology

Année:

2009

Langue:

english

Fichier:

PDF, 524 KB

english, 2009

49

Treatment of Fungal Bioaerosols by a High-Temperature, Short-Time Process in a Continuous-Flow System

Jung, J. H., Lee, J. E., Lee, C. H., Kim, S. S., Lee, B. U.

Journal:

Applied and Environmental Microbiology

Année:

2009

Langue:

english

Fichier:

PDF, 1.19 MB

english, 2009

50

AguR Is Required for Induction of the Streptococcus mutans Agmatine Deiminase System by Low pH and Agmatine

Liu, Y., Zeng, L., Burne, R. A.

Journal:

Applied and Environmental Microbiology

Année:

2009

Langue:

english

Fichier:

PDF, 1.38 MB

english, 2009

51

Contrasting Effects of Heat Treatment and Incubation Temperature on Germination and Outgrowth of Individual Spores of Nonproteolytic Clostridium botulinum Bacteria

Stringer, S. C., Webb, M. D., Peck, M. W.

Journal:

Applied and Environmental Microbiology

Année:

2009

Langue:

english

Fichier:

PDF, 1.04 MB

english, 2009

52

Effect of Iron Concentration on the Growth Rate of Pseudomonas syringae and the Expression of Virulence Factors in hrp-Inducing Minimal Medium

Kim, B. J., Park, J. H., Park, T. H., Bronstein, P. A., Schneider, D. J., Cartinhour, S. W., Shuler, M. L.

Journal:

Applied and Environmental Microbiology

Année:

2009

Langue:

english

Fichier:

PDF, 450 KB

english, 2009

53

Striking Diversity of vmp1, a Variable Gene Encoding a Putative Membrane Protein of the Stolbur Phytoplasma

Cimerman, A., Pacifico, D., Salar, P., Marzachi, C., Foissac, X.

Journal:

Applied and Environmental Microbiology

Année:

2009

Langue:

english

Fichier:

PDF, 703 KB

english, 2009

54

Establishment of Oxidative D-Xylose Metabolism in Pseudomonas putida S12

Meijnen, J.-P., de Winde, J. H., Ruijssenaars, H. J.

Journal:

Applied and Environmental Microbiology

Année:

2009

Langue:

english

Fichier:

PDF, 701 KB

english, 2009

55

Biosynthesis of Sibiromycin, a Potent Antitumor Antibiotic

Li, W., Khullar, A., Chou, S., Sacramo, A., Gerratana, B.

Journal:

Applied and Environmental Microbiology

Année:

2009

Langue:

english

Fichier:

PDF, 861 KB

english, 2009