Volume 9; Issue 7

Journal of Proteome Research

Volume 9; Issue 7

1

Proteomic Analysis of Laser Microdissected Melanoma Cells from Skin Organ Cultures

Hood, Brian L., Grahovac, Jelena, Flint, Melanie S., Sun, Mai, Charro, Nuno, Becker, Dorothea, Wells, Alan, Conrads, Thomas P.

Journal:

Journal of Proteome Research

Année:

2010

Langue:

english

Fichier:

PDF, 328 KB

english, 2010

2

A Multivariate Approach To Reveal Biomarker Signatures for Disease Classification: Application to Mass Spectral Profiles of Cerebrospinal Fluid from Patients with Multiple Sclerosis

Rajalahti, Tarja, Kroksveen, Ann C., Arneberg, Reidar, Berven, Frode S., Vedeler, Christian A., Myhr, Kjell-Morten, Kvalheim, Olav M.

Journal:

Journal of Proteome Research

Année:

2010

Langue:

english

Fichier:

PDF, 4.66 MB

english, 2010

3

Analysis of Root Plasma Membrane Aquaporins from Brassica oleracea : Post-Translational Modifications, de novo Sequencing and Detection of Isoforms by High Resolution Mass Spectrometry

Casado-Vela, J., Muries, B., Carvajal, M., Iloro, I., Elortza, F., Martínez-Ballesta, M.C.

Journal:

Journal of Proteome Research

Année:

2010

Langue:

english

Fichier:

PDF, 1.19 MB

english, 2010

4

Profile of Macrophages in Human Abdominal Aortic Aneurysms: A Transcriptomic, Proteomic, and Antibody Protein Array Study

Lamblin, Nicolas, Ratajczak, Philippe, Hot, David, Dubois, Emilie, Chwastyniak, Maggy, Beseme, Olivia, Drobecq, Hervé, Lemoine, Yves, Koussa, Mohammad, Amouyel, Philippe, Pinet, Florence

Journal:

Journal of Proteome Research

Année:

2010

Langue:

english

Fichier:

PDF, 365 KB

english, 2010

5

Optimized IMAC−IMAC Protocol for Phosphopeptide Recovery from Complex Biological Samples

Ye, Juanying, Zhang, Xumin, Young, Clifford, Zhao, Xiaolu, Hao, Qin, Cheng, Lei, Jensen, Ole Nørregaard

Journal:

Journal of Proteome Research

Année:

2010

Langue:

english

Fichier:

PDF, 5.50 MB

english, 2010

6

Proteome, Phosphoproteome, and N-Glycoproteome Are Quantitatively Preserved in Formalin-Fixed Paraffin-Embedded Tissue and Analyzable by High-Resolution Mass Spectrometry

Ostasiewicz, Paweł, Zielinska, Dorota F., Mann, Matthias, Wiśniewski, Jacek R.

Journal:

Journal of Proteome Research

Année:

2010

Langue:

english

Fichier:

PDF, 467 KB

english, 2010

7

14-3-3 Epsilon Dynamically Interacts with Key Components of Mitogen-Activated Protein Kinase Signal Module for Selective Modulation of the TNF-α-Induced Time Course-Dependent NF-κB Activity

Zuo, Shuai, Xue, Yan, Tang, Siwei, Yao, Jun, Du, Ruyun, Yang, Pengyuan, Chen, Xian

Journal:

Journal of Proteome Research

Année:

2010

Langue:

english

Fichier:

PDF, 2.54 MB

english, 2010

8

Identification of Yersinia pestis and Escherichia coli Strains by Whole Cell and Outer Membrane Protein Extracts with Mass Spectrometry-Based Proteomics

Jabbour, Rabih E., Wade, Mary Margaret, Deshpande, Samir V., Stanford, Michael F., Wick, Charles H., Zulich, Alan W., Snyder, A. Peter

Journal:

Journal of Proteome Research

Année:

2010

Langue:

english

Fichier:

PDF, 415 KB

english, 2010

9

Complexome of Escherichia coli Envelope Proteins under Normal Physiological Conditions

Pan, Jian-Yi, Li, Hui, Ma, Yan, Chen, Ping, Zhao, Ping, Wang, San-Ying, Peng, Xuan-Xian

Journal:

Journal of Proteome Research

Année:

2010

Langue:

english

Fichier:

PDF, 4.88 MB

english, 2010

10

A Proteomic-Based Approach for Detection of Chicken in Meat Mixes

Sentandreu, Miguel A., Fraser, Paul D., Halket, John, Patel, Raj, Bramley, Peter M.

Journal:

Journal of Proteome Research

Année:

2010

Langue:

english

Fichier:

PDF, 4.58 MB

english, 2010

11

Human Milk Proteins: An Interactomics and Updated Functional Overview

D’Alessandro, Angelo, Scaloni, Andrea, Zolla, Lello

Journal:

Journal of Proteome Research

Année:

2010

Langue:

english

Fichier:

PDF, 2.76 MB

english, 2010

12

System-Level Comparison of Protein−Protein Interactions between Viruses and the Human Type I Interferon System Network

Navratil, V., de Chassey, B., Meyniel, L., Pradezynski, F., André, P., Rabourdin-Combe, C., Lotteau, V.

Journal:

Journal of Proteome Research

Année:

2010

Langue:

english

Fichier:

PDF, 4.04 MB

english, 2010

13

Amniotic Fluid Proteome Analysis from Down Syndrome Pregnancies for Biomarker Discovery

Cho, Chan-Kyung J., Smith, Christopher R., Diamandis, Eleftherios P.

Journal:

Journal of Proteome Research

Année:

2010

Langue:

english

Fichier:

PDF, 1.77 MB

english, 2010

14

Assigning N-Glycosylation Sites of Glycoproteins Using LC/MSMS in Conjunction with Endo-M/Exoglycosidase Mixture

Segu, Zaneer M., Hussein, Ahmed, Novotny, Milos V., Mechref, Yehia

Journal:

Journal of Proteome Research

Année:

2010

Langue:

english

Fichier:

PDF, 4.42 MB

english, 2010

15

Metabolic Profiling of Accelerated Aging ERCC1 d/− Mice

Nevedomskaya, Ekaterina, Meissner, Axel, Goraler, Sibel, de Waard, Monique, Ridwan, Yanto, Zondag, Gerben, van der Pluijm, Ingrid, Deelder, André M., Mayboroda, Oleg A.

Journal:

Journal of Proteome Research

Année:

2010

Langue:

english

Fichier:

PDF, 1.51 MB

english, 2010

16

Novel Application of Electrostatic Repulsion-Hydrophilic Interaction Chromatography (ERLIC) in Shotgun Proteomics: Comprehensive Profiling of Rat Kidney Proteome

Hao, Piliang, Guo, Tiannan, Li, Xin, Adav, Sunil S., Yang, Jie, Wei, Meng, Sze, Siu Kwan

Journal:

Journal of Proteome Research

Année:

2010

Langue:

english

Fichier:

PDF, 812 KB

english, 2010

17

Improving Protein and Proteome Coverage through Data-Independent Multiplexed Peptide Fragmentation

Blackburn, Kevin, Mbeunkui, Flaubert, Mitra, Srijeet K., Mentzel, Tobias, Goshe, Michael B.

Journal:

Journal of Proteome Research

Année:

2010

Langue:

english

Fichier:

PDF, 3.76 MB

english, 2010

18

Isotope Signatures Allow Identification of Chemically Cross-Linked Peptides by Mass Spectrometry: A Novel Method to Determine Interresidue Distances in Protein Structures through Cross-Linking

Zelter, Alex, Hoopmann, Michael R., Vernon, Robert, Baker, David, MacCoss, Michael J., Davis, Trisha N.

Journal:

Journal of Proteome Research

Année:

2010

Langue:

english

Fichier:

PDF, 1.98 MB

english, 2010

19

Production of 18 O-Single Labeled Peptide Fragments during Trypsin Digestion of Proteins for Quantitative Proteomics Using nanoLC−ESI−MS/MS

Mori, Masaru, Abe, Kohei, Yamaguchi, Hiroaki, Goto, Junichi, Shimada, Miki, Mano, Nariyasu

Journal:

Journal of Proteome Research

Année:

2010

Langue:

english

Fichier:

PDF, 1.19 MB

english, 2010

20

Quantitative Analysis of mTRAQ-Labeled Proteome Using Full MS Scans

Kang, Un-Beom, Yeom, Jeonghun, Kim, Hoguen, Lee, Cheolju

Journal:

Journal of Proteome Research

Année:

2010

Langue:

english

Fichier:

PDF, 1.56 MB

english, 2010

21

Identification of Extracellular Matrix Proteins of Rice ( Oryza sativa L.) Involved in Dehydration-Responsive Network: A Proteomic Approach

Pandey, Aarti, Rajamani, Uma, Verma, Jitendra, Subba, Pratigya, Chakraborty, Navjyoti, Datta, Asis, Chakraborty, Subhra, Chakraborty, Niranjan

Journal:

Journal of Proteome Research

Année:

2010

Langue:

english

Fichier:

PDF, 9.68 MB

english, 2010

22

Aspergillus Protein Degradation Pathways with Different Secreted Protease Sets at Neutral and Acidic pH

Sriranganadane, Dev, Waridel, Patrice, Salamin, Karine, Reichard, Utz, Grouzmann, Eric, Neuhaus, Jean-Marc, Quadroni, Manfredo, Monod, Michel

Journal:

Journal of Proteome Research

Année:

2010

Langue:

english

Fichier:

PDF, 2.79 MB

english, 2010

23

Use of an Atmospheric Solids Analysis Probe (ASAP) for High Throughput Screening of Biological Fluids: Preliminary Applications on Urine and Bile

Twohig, Marian, Shockcor, John P., Wilson, Ian D., Nicholson, Jeremy K., Plumb, Robert S.

Journal:

Journal of Proteome Research

Année:

2010

Langue:

english

Fichier:

PDF, 3.66 MB

english, 2010

24

N-Glycan Analysis of Recombinant L-Selectin Reveals Sulfated GalNAc and GalNAc−GalNAc Motifs

Wedepohl, Stefanie, Kaup, Matthias, Riese, Sebastian B., Berger, Markus, Dernedde, Jens, Tauber, Rudolf, Blanchard, Véronique

Journal:

Journal of Proteome Research

Année:

2010

Langue:

english

Fichier:

PDF, 2.49 MB

english, 2010

25

Aging in Mouse Brain Is a Cell/Tissue-Level Phenomenon Exacerbated by Proteasome Loss

Mao, Lei, Römer, Irmgard, Nebrich, Grit, Klein, Oliver, Koppelstätter, Andrea, Hin, Sascha C., Hartl, Daniela, Zabel, Claus

Journal:

Journal of Proteome Research

Année:

2010

Langue:

english

Fichier:

PDF, 2.64 MB

english, 2010

26

Nuclear Proteome Dynamics in Differentiating Embryonic Carcinoma (NTERA-2) Cells

Pewsey, Emma, Bruce, Christine, Tonge, Peter, Evans, Caroline, Ow, Saw Yen, Georgiou, A. Stephen, Wright, Phillip C., Andrews, Peter W., Fazeli, Alireza

Journal:

Journal of Proteome Research

Année:

2010

Langue:

english

Fichier:

PDF, 4.34 MB

english, 2010

27

Glycopeptidome of a Heavily N-Glycosylated Cell Surface Glycoprotein of Dictyostelium Implicated in Cell Adhesion

Feasley, Christa L., Johnson, Jennifer M., West, Christopher M., Chia, Catherine P.

Journal:

Journal of Proteome Research

Année:

2010

Langue:

english

Fichier:

PDF, 4.85 MB

english, 2010

28

A Metabolic Entropy Approach for Measurements of Systemic Metabolic Disruptions in Patho-Physiological States

Veselkov, Kirill A., Pahomov, Valeriy I., Lindon, John C., Volynkin, Vladimir S., Crockford, Derek, Osipenko, George S., Davies, David B., Barton, Richard H., Bang, Jung-Wook, Holmes, Elaine, Nicholso

Journal:

Journal of Proteome Research

Année:

2010

Langue:

english

Fichier:

PDF, 1.76 MB

english, 2010

29

Quantitative Proteomic Profiling Studies of Pancreatic Cancer Stem Cells

Dai, Lan, Li, Chen, Shedden, Kerby A., Lee, Cheong J., Li, Chenwei, Quoc, HuyVuong, Simeone, Diane M., Lubman, David M.

Journal:

Journal of Proteome Research

Année:

2010

Langue:

english

Fichier:

PDF, 2.03 MB

english, 2010

30

Proteome Profiling and Functional Classification of Intracellular Proteins from Conidia of the Human-Pathogenic Mold Aspergillus fumigatus

Teutschbein, Janka, Albrecht, Daniela, Pötsch, Maria, Guthke, Reinhard, Aimanianda, Vishukumar, Clavaud, Cécile, Latgé, Jean-Paul, Brakhage, Axel A., Kniemeyer, Olaf

Journal:

Journal of Proteome Research

Année:

2010

Langue:

english

Fichier:

PDF, 2.95 MB

english, 2010

31

Analysis of Detergent-Insoluble and Whole Cell Lysate Fractions of Resting Neutrophils Using High-Resolution Mass Spectrometry

Tomazella, Gisele G., daSilva, Idalete, Thomé, Carolina H., Greene, Lewis J., Koehler, Christian J., Thiede, Bernd, Wiker, Harald G., de Souza, Gustavo A.

Journal:

Journal of Proteome Research

Année:

2010

Fichier:

PDF, 51 KB

2010

32

ITIH3 Is a Potential Biomarker for Early Detection of Gastric Cancer

Chong, Poh Kuan, Lee, Huiyin, Zhou, Jianbiao, Liu, Shaw-Cheng, Loh, Marie Chiew Shia, Wang, Ting Ting, Chan, Siew Pang, Smoot, Duane T., Ashktorab, Hassan, So, Jimmy Bok Yan, Lim, Khong Hee, Yeoh, Kha

Journal:

Journal of Proteome Research

Année:

2010

Langue:

english

Fichier:

PDF, 2.04 MB

english, 2010

33

Database Search Algorithm for Identification of Intact Cross-Links in Proteins and Peptides Using Tandem Mass Spectrometry

Xu, Hua, Hsu, Pang-Hung, Zhang, Liwen, Tsai, Ming-Daw, Freitas, Michael A.

Journal:

Journal of Proteome Research

Année:

2010

Langue:

english

Fichier:

PDF, 3.07 MB

english, 2010

34

Detection and Structural Characterization of Natural Ara h 7, the Third Peanut Allergen of the 2S Albumin Family

Schmidt, Hendrik, Krause, Susanne, Gelhaus, Christoph, Petersen, Arnd, Janssen, Ottmar, Becker, Wolf-Meinhard

Journal:

Journal of Proteome Research

Année:

2010

Langue:

english

Fichier:

PDF, 3.34 MB

english, 2010

35

Gold Nanoparticles Amplified Ultrasensitive Quantification of Human Urinary Protein by Capillary Electrophoresis with On-Line Inductively Coupled Plasma Mass Spectroscopic Detection

Liu, Jing-Min, Li, Yan, Jiang, Yan, Yan, Xiu-Ping

Journal:

Journal of Proteome Research

Année:

2010

Langue:

english

Fichier:

PDF, 1.24 MB

english, 2010

36

Panel of Candidate Biomarkers for Renal Cell Carcinoma

Kim, Dong Su, Choi, Yoon Pyo, Kang, Suki, Gao, Ming Qing, Kim, Baekil, Park, Haeng Ran, Choi, Young Deuk, Lim, Jong Baek, Na, Hyung Jin, Kim, Hye Kyung, Nam, Young-Pyo, Moon, Mi Hyang, Yun, Hae Ree, L

Journal:

Journal of Proteome Research

Année:

2010

Langue:

english

Fichier:

PDF, 3.16 MB

english, 2010

37

Discrimination of Patients with Microsatellite Instability Colon Cancer using 1 H HR MAS MR Spectroscopy and Chemometric Analysis

Tessem, May-Britt, Selnæs, Kirsten M., Sjursen, Wenche, Tranø, Gerd, Giskeødegård, Guro F., Bathen, Tone F., Gribbestad, Ingrid S., Hofsli, Eva

Journal:

Journal of Proteome Research

Année:

2010

Langue:

english

Fichier:

PDF, 1.99 MB

english, 2010

38

Stable Isotope Labeling by Amino Acids in Cell Culture (SILAC) Applied to Quantitative Proteomics of Bacillus subtilis

Soufi, Boumediene, Kumar, Chanchal, Gnad, Florian, Mann, Matthias, Mijakovic, Ivan, Macek, Boris

Journal:

Journal of Proteome Research

Année:

2010

Langue:

english

Fichier:

PDF, 2.08 MB

english, 2010

39

EpiC: An Open Resource for Exploring Epitopes To Aid Antibody-Based Experiments

Haslam, Niall J., Gibson, Toby J.

Journal:

Journal of Proteome Research

Année:

2010

Langue:

english

Fichier:

PDF, 1.88 MB

english, 2010