Volume 7; Issue 5

Journal of Proteome Research

Volume 7; Issue 5

1

Proteomics as a Complementary Tool for Identifying Unintended Side Effects Occurring in Transgenic Maize Seeds As a Result of Genetic Modifications

Zolla, Lello, Rinalducci, Sara, Antonioli, Paolo, Righetti, Pier Giorgio

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 4.50 MB

english, 2008

2

High-Throughput, Combinatorial Engineering of Initial Codons for Tunable Expression of Recombinant Proteins

Ahn, Jin-Ho, Keum, Jung-Won, Kim, Dong-Myung

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 4.69 MB

english, 2008

3

Cell-Specific Aptamer Probes for Membrane Protein Elucidation in Cancer Cells

Shangguan, Dihua, Cao, Zehui, Meng, Ling, Mallikaratchy, Prabodhika, Sefah, Kwame, Wang, Hui, Li, Ying, Tan, Weihong

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 1.95 MB

english, 2008

4

Psychoproteomic Analysis of Rat Cortex Following Acute Methamphetamine Exposure

Kobeissy, Firas H., Warren, Matthew W., Ottens, Andrew K., Sadasivan, Shankar, Zhang, Zhiqun, Gold, Mark S., Wang, Kevin K. W.

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 6.85 MB

english, 2008

5

Isolation and Identification of Potential Urinary Microparticle Biomarkers of Bladder Cancer

Smalley, David M., Sheman, Nicholas E., Nelson, Kristina, Theodorescu, Dan

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 2.60 MB

english, 2008

6

Advances in the Analysis of Protein Phosphorylation

Paradela, Alberto, Albar, Juan Pablo

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 2.04 MB

english, 2008

7

Determination and Comparison of the Francisella tularensis subsp. novicida U112 Proteome to Other Bacterial Proteomes

Rohmer, Laurence, Guina, Tina, Chen, Jinzhi, Gallis, Byron, Taylor, Greg K., Shaffer, Scott A., Miller, Samuel I., Brittnacher, Mitchell J., Goodlett, David R.

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 1.28 MB

english, 2008

8

Influence of the Protein Staining in the Fast Ultrasonic Sample Treatment for Protein Identification through Peptide Mass Fingerprint and Matrix-Assisted Laser Desorption Ionization Time of Flight Mass Spectrometry

Galesio, M., Vieira, D. V., Rial-Otero, R., Lodeiro, C., Moura, I., Capelo, J. L.

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 770 KB

english, 2008

9

Multiple Stressor-Induced Proteome Responses of Escherichia coli BL21(DE3)

Han, Kyung-Yeon, Park, Jin-Seung, Seo, Hyuk-Seong, Ahn, Keum-Young, Lee, Jeewon

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 6.97 MB

english, 2008

10

Metabonomic and Metallomic Profiling in the Amniotic Fluid of Malnourished Pregnant Rats

Shen, Qing, Li, Xin, Qiu, Yunping, Su, Mingming, Liu, Yumin, Li, Houkai, Wang, Xiaoyan, Zou, Xiangyu, Yan, Chonghuai, Yu, Lan, Li, Sheng, Wan, Chunling, He, Lin, Jia, Wei

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 1.93 MB

english, 2008

11

Proteomics of the Nucleus Ovoidalis and Field L Brain Regions of Zebra Finch

Benjamin, Alexander, Kashem, Moses, Cohen, Camille, Caldwell Busby, Jennifer A., Salgado-Commissariat, Delanthi, Helekar, Santosh A., Bhattacharya, Sanjoy K.

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 6.13 MB

english, 2008

12

PepLine: A Software Pipeline for High-Throughput Direct Mapping of Tandem Mass Spectrometry Data on Genomic Sequences

Ferro, Myriam, Tardif, Marianne, Reguer, Erwan, Cahuzac, Romain, Bruley, Christophe, Vermat, Thierry, Nugues, Estelle, Vigouroux, Marielle, Vandenbrouck, Yves, Garin, Jérôme, Viari, Alain

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 3.27 MB

english, 2008

13

Motif-Specific Sampling of Phosphoproteomes

Ruse, Cristian I., McClatchy, Daniel B., Lu, Bingwen, Cociorva, Daniel, Motoyama, Akira, Park, Sung Kyu, Yates, John R.

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 3.43 MB

english, 2008

14

Electron Transfer Dissociation of Peptides Generated by Microwave D-Cleavage Digestion of Proteins

Hauser, Nicolas J., Han, Hongling, McLuckey, Scott A., Basile, Franco

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 447 KB

english, 2008

15

Humoral Immunity Directed against Tumor-Associated Antigens As Potential Biomarkers for the Early Diagnosis of Cancer

Lu, Hailing, Goodell, Vivian, Disis, Mary L.

Journal:

Journal of Proteome Research

Année:

2008

Fichier:

PDF, 50 KB

2008

16

A Combined Metabolomic and Proteomic Investigation of the Effects of a Failure to Express Dystrophin in the Mouse Heart

Gulston, Melanie K., Rubtsov, Denis V., Atherton, Helen J., Clarke, Kieran, Davies, Kay E., Lilley, Kathryn S., Griffin, Julian L.

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 2.95 MB

english, 2008

17

The Proteomes of Human Parotid and Submandibular/Sublingual Gland Salivas Collected as the Ductal Secretions

Denny, Paul, Hagen, Fred K., Hardt, Markus, Liao, Lujian, Yan, Weihong, Arellanno, Martha, Bassilian, Sara, Bedi, Gurrinder S., Boontheung, Pinmannee, Cociorva, Daniel, Delahunty, Claire M., Denny, Tr

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 5.46 MB

english, 2008

18

SALAMI ( S pectrum AL ignments Using High A ccuracy M ass and H I gh Sensitivity Data): How To Make the Best out of Hybrid MS/MS Data

Monigatti, Flavio, Steen, Hanno

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 1.15 MB

english, 2008

19

Use of Peptide Analogue Diversity Library Beads for Increased Depth of Proteomic Analysis: Application to Cerebrospinal Fluid

Shores, Kevin S., Udugamasooriya, D. Gomika, Kodadek, Thomas, Knapp, Daniel R.

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 223 KB

english, 2008

20

A Concentration-Dependent Analysis Method for High Density Protein Microarrays

Marina, Ovidiu, Biernacki, Melinda A., Brusic, Vladimir, Wu, Catherine J.

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 3.85 MB

english, 2008

21

Prognostic Significance of Head-and-Neck Cancer Biomarkers Previously Discovered and Identified Using iTRAQ-Labeling and Multidimensional Liquid Chromatography−Tandem Mass Spectrometry

Matta, Ajay, DeSouza, Leroi V., Shukla, Nootan Kumar, Gupta, Siddhartha D., Ralhan, Ranju, Siu, K. W. Michael

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 6.65 MB

english, 2008

22

Synthesis, Chaperoning, and Metabolism of Proteins Are Regulated by NT-3/TrkC Signaling in the Medulloblastoma Cell Line DAOY

Gruber-Olipitz, Mariella, Ströbel, Thomas, Chen, Wei-Qiang, Grotzer, Michael A., Quehenberger, Franz, Slavc, Irene, Lubec, Gert

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 4.18 MB

english, 2008

23

Autoantibody Profiling of Chinese Patients with Autoimmune Hepatitis Using Immunoproteomic Analysis

Xia, Qing, Lu, Feng, Yan, Hui-Ping, Wang, Hong-Xia, Feng, Xia, Zhao, Yan, Liu, Bing-Yv, Wang, Jie, Li, Ping, Xue, Yan, Hu, Mei-Ru, Qian, Lu, Guo, Ning, Yang, Song-Cheng, Li, Ming-Yuan, Ma, Yuan-Fang,

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 2.15 MB

english, 2008

24

Differences in Hippocampal Protein Expression at 3 Days, 3 Weeks, and 3 Months Following Induction of Perinatal Asphyxia in the Rat

Weitzdörfer, Rachel, Höger, Harald, Burda, Gudrun, Pollak, Arnold, Lubec, Gert

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 1.07 MB

english, 2008

25

The Reductive Desulfurization of Met and Cys Residues in Bovine RNase A Is Associated with trans Lipids Formation in a Mimetic Model of Biological Membranes

Ferreri, Carla, Chatgilialoglu, Chryssostomos, Torreggiani, Armida, Salzano, Anna Maria, Renzone, Giovanni, Scaloni, Andrea

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 767 KB

english, 2008

26

Proteomic Analysis of Human Cervico−Vaginal Fluid Displays Differential Protein Expression in Association with Labor Onset at Term

Quinzio, Megan K. W. Di, Georgiou, Harry M., Holdsworth-Carson, Sarah J., Ayhan, Mustafa, Heng, Yujing J., Walker, Susan P., Rice, Gregory E., Permezel, Michael

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 1.15 MB

english, 2008

27

Comparative Proteomic Analysis of Indioside D-Triggered Cell Death in HeLa Cells

Wong, Chi Chun, Wang, Ying, Cheng, Ka-Wing, Chiu, Jen-Fu, He, Qing-Yu, Chen, Feng

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 5.14 MB

english, 2008

28

Proteomic Screening of a Cell Line Model of Esophageal Carcinogenesis Identifies Cathepsin D and Aldo-Keto Reductase 1C2 and 1B10 Dysregulation in Barrett’s Esophagus and Esophageal Adenocarcinoma

Breton, Jean, Gage, Matthew C., Hay, Alastair W., Keen, Jeffrey N., Wild, Christopher P., Donnellan, Clare, Findlay, John B. C., Hardie, Laura J.

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 2.98 MB

english, 2008

29

A “Tagless” Strategy for Identification of Stable Protein Complexes Genome-wide by Multidimensional Orthogonal Chromatographic Separation and iTRAQ Reagent Tracking

Dong, Ming, Yang, Lee Lisheng, Williams, Katherine, Fisher, Susan J., Hall, Steven C., Biggin, Mark D., Jin, Jian, Witkowska, H. Ewa

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 5.52 MB

english, 2008

30

Full Mass Spectrometric Characterization of Human Monoacylglycerol Lipase Generated by Large-Scale Expression and Single-Step Purification

Zvonok, Nikolai, Williams, John, Johnston, Meghan, Pandarinathan, Lakshmipathi, Janero, David R., Li, Jing, Krishnan, Srinivasan C., Makriyannis, Alexandros

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 1.51 MB

english, 2008

31

Proteomic Analysis of Amniotic Fluid in Pregnancies with Turner Syndrome Fetuses

Mavrou, Ariadni, Anagnostopoulos, Athanasios K., Kolialexi, Aggeliki, Vougas, Konstantinos, Papantoniou, Nikos, Antsaklis, Aris, Fountoulakis, Michael, Tsangaris, George Th.

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 2.01 MB

english, 2008

32

Proteomics of Two Cultivated Mushrooms Sparassis crispa and Hericium erinaceum Provides Insight into their Numerous Functional Protein Components and Diversity

Horie, Kiyotaka, Rakwal, Randeep, Hirano, Misato, Shibato, Junko, Nam, Hyung Wook, Kim, Yu Sam, Kouzuma, Yoshiaki, Agrawal, Ganesh Kumar, Masuo, Yoshinori, Yonekura, Masami

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 19.85 MB

english, 2008

33

Characterization of Tau in Cerebrospinal Fluid Using Mass Spectrometry

Portelius, Erik, Hansson, Sara F., Tran, Ai Jun, Zetterberg, Henrik, Grognet, Pierre, Vanmechelen, Eugeen, Höglund, Kina, Brinkmalm, Gunnar, Westman-Brinkmalm, Ann, Nordhoff, Eckhard, Blennow, Kaj, Go

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 556 KB

english, 2008

34

A Novel Probe Au(III) for Chemiluminescent Image Detection of Protein Blots on Nitrocellulose Membranes

Liu, Jia, Liu, Xia, Baeyens, Willy R. G., Delanghe, Joris R., Ouyang, Jin

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 6.34 MB

english, 2008

35

Proteomic Profiling of Nonenzymatically Glycated Proteins in Human Plasma and Erythrocyte Membranes

Zhang, Qibin, Tang, Ning, Schepmoes, Athena A., Phillips, Lawrence S., Smith, Richard D., Metz, Thomas O.

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 444 KB

english, 2008

36

Relation of Time of Introduction of Cow Milk Protein to an Infant and Risk of Type-1 Diabetes Mellitus

Goldfarb, Marcia F.

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 73 KB

english, 2008

37

Quantitative Analysis of Surface Plasma Membrane Proteins of Primary and Metastatic Melanoma Cells

Qiu, Haibo, Wang, Yinsheng

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 1.55 MB

english, 2008

38

Predominant Release of Lysosomal Enzymes by Newborn Rat Microglia After LPS Treatment Revealed by Proteomic Studies

Liu, Jun, Hong, Zhen, Ding, Jianqing, Liu, Jianrong, Zhang, Jing, Chen, Shengdi

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 2.24 MB

english, 2008

39

Move Over Proteomics, Here Comes Glycomics

Srivastava, Sudhir

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 138 KB

english, 2008

40

Therapeutic targets of multiple sclerosis | Screen for extracellular protein interactions | Cracking combinatorial codes in embryonic stem cells | NMR metabonomic profiling of bipolar disorder | Evaluating the core proteome of bacteria | Correlating proteomics and mRNA microarray data | Porous gold protein arrays and MS | Top-down proteotyping of human leukocytes

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 1.07 MB

english, 2008

41

Spectral alignment for top-down MS | BiSSCat | Zebrafish protein database | Automatic GUI | Assessing the quality of protein-protein interactions | TagFinder

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 412 KB

english, 2008

42

Protein-complex characterization goes tagless

Cassiday, Laura

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 246 KB

english, 2008

43

Human Toponome Project | Human Proteinpedia is open for (free) business

Cottingham, Katie

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 630 KB

english, 2008

44

Calendar

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 129 KB

english, 2008

45

New Products

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 947 KB

english, 2008

46

Using aptamers to identify cancer cell biomarkers

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 322 KB

english, 2008