Volume 7; Issue 11

Journal of Proteome Research

Volume 7; Issue 11

1

Enhanced Capacity of Antigen Presentation of HBc-VLP-Pulsed RAW264.7 Cells Revealed by Proteomics Analysis

Yang, Fu, Wang, Fang, Guo, Yingjun, Zhou, Qi, Wang, Yue, Yin, Yixuan, Sun, Shuhan

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 2.46 MB

english, 2008

2

Detergent-Based but Gel-Free Method Allows Identification of Several Hundred Membrane Proteins in Single LC-MS Runs

Nagaraj, Nagarjuna, Lu, Aiping, Mann, Matthias, Wiśniewski, Jacek R.

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 224 KB

english, 2008

3

The Impact of Peptide Abundance and Dynamic Range on Stable-Isotope-Based Quantitative Proteomic Analyses

Bakalarski, Corey E., Elias, Joshua E., Villén, Judit, Haas, Wilhelm, Gerber, Scott A., Everley, Patrick A., Gygi, Steven P.

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 1.28 MB

english, 2008

4

A Spectral Clustering Approach to MS/MS Identification of Post-Translational Modifications

Falkner, Jayson A., Falkner, Jarret W., Yocum, Anastasia K., Andrews, Philip C.

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 453 KB

english, 2008

5

Protein Expression Profile of the Mouse Metaphase-II Oocyte

Ma, Minyue, Guo, Xuejiang, Wang, Fuqiang, Zhao, Chun, Liu, Zichuan, Shi, Zhonghua, Wang, Yufeng, Zhang, Ping, Zhang, Kemei, Wang, Ningling, Lin, Min, Zhou, Zuomin, Liu, Jiayin, Li, Qingzhang, Wang, Li

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 5.92 MB

english, 2008

6

Different Residues in Channel Turret Determining the Selectivity of ADWX-1 Inhibitor Peptide between Kv1.1 and Kv1.3 Channels

Yin, Shi-Jin, Jiang, Ling, Yi, Hong, Han, Song, Yang, Dai-Wen, Liu, Mai-Li, Liu, Hui, Cao, Zhi-Jian, Wu, Ying-Liang, Li, Wen-Xin

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 3.54 MB

english, 2008

7

Proteome Analysis of Potato under Salt Stress

Aghaei, Keyvan, Ehsanpour, Ali Akbar, Komatsu, Setsuko

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 4.89 MB

english, 2008

8

Impact of rpoS Deletion on the Proteome of Escherichia coli Grown Planktonically and as Biofilm

Collet, Anthony, Cosette, Pascal, Beloin, Christophe, Ghigo, Jean-Marc, Rihouey, Christophe, Lerouge, Patrice, Junter, Guy-Alain, Jouenne, Thierry

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 5.85 MB

english, 2008

9

A Comparative Study of Electrostatic Repulsion-Hydrophilic Interaction Chromatography (ERLIC) versus SCX-IMAC-Based Methods for Phosphopeptide Isolation/Enrichment

Gan, Chee Sian, Guo, Tiannan, Zhang, Huoming, Lim, Sai Kiang, Sze, Siu Kwan

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 1.45 MB

english, 2008

10

Differential Proteome Expression Associated with Urokinase Plasminogen Activator Receptor (uPAR) Suppression in Malignant Epithelial Cancer

Saldanha, Rohit G., Xu, Ning, Molloy, Mark P., Veal, Duncan A., Baker, Mark S.

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 4.78 MB

english, 2008

11

A Combination of Immobilised pH Gradients Improves Membrane Proteomics

Chick, J. M., Haynes, P. A., Bjellqvist, B., Baker, M. S.

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 1.24 MB

english, 2008

12

Proteomics researchers now agree on some aspects of data sharing

Cottingham, Katie

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 44 KB

english, 2008

13

Efficient Chymotryptic Proteolysis Enhanced by Infrared Radiation for Peptide Mapping

Wang, Sheng, Liu, Ting, Zhang, Luyan, Chen, Gang

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 588 KB

english, 2008

14

Transcriptomic and Metabonomic Profiling of Obesity-Prone and Obesity-Resistant Rats under High Fat Diet

Li, Houkai, Xie, Zuoquan, Lin, Jingchao, Song, Huaiguang, Wang, Qi, Wang, Ke, Su, Mingming, Qiu, Yunping, Zhao, Tie, Song, Kai, Wang, Xiaoyan, Zhou, Mingmei, Liu, Ping, Zhao, Guoping, Zhang, Qinghua,

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 2.44 MB

english, 2008

15

Distinction between Human Cytochrome P450 (CYP) Isoforms and Identification of New Phosphorylation Sites by Mass Spectrometry

Redlich, Gorden, Zanger, Ulrich M., Riedmaier, Stephan, Bache, Nicolai, Giessing, Anders B. M., Eisenacher, Martin, Stephan, Christian, Meyer, Helmut E., Jensen, Ole N., Marcus, Katrin

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 992 KB

english, 2008

16

Activated Epidermal Growth Factor Receptor as a Novel Target in Pancreatic Cancer Therapy

Harsha, H. C., Jimeno, Antonio, Molina, Henrik, Mihalas, Anca B., Goggins, Michael G., Hruban, Ralph H., Schulick, Richard D., Kamath, Ullas, Maitra, Anirban, Hidalgo, Manuel, Pandey, Akhilesh

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 9.42 MB

english, 2008

17

Hybridization of Pulsed-Q Dissociation and Collision-Activated Dissociation in Linear Ion Trap Mass Spectrometer for iTRAQ Quantitation

Guo, Tiannan, Gan, Chee Sian, Zhang, Huoming, Zhu, Yi, Kon, Oi Lian, Sze, Siu Kwan

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 2.38 MB

english, 2008

18

Proteome Analysis of Multidrug Resistance of Human Oral Squamous Carcinoma Cells Using CD147 Silencing

Kuang, Ye-Hong, Chen, Xiang, Su, Juan, Wu, Li-Sha, Li, Ji, Chang, Jing, Qiu, Ying, Chen, Zhe-Sheng, Kanekura, Takuro

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 4.30 MB

english, 2008

19

Proteomic Analysis of the Hyaloid Vascular System Regression during Ocular Development

Albè, Elena, Chang, Jin-Hong, Azar, Nathalie F., Ivanov, Alexander R., Azar, Dimitri T.

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 7.30 MB

english, 2008

20

RPLC-Ion-Trap-FTMS Method for Lipid Profiling of Plasma: Method Validation and Application to p53 Mutant Mouse Model

Hu, Chunxiu, van Dommelen, Judith, van der Heijden, Rob, Spijksma, Gerwin, Reijmers, Theo H., Wang, Mei, Slee, Elizabeth, Lu, Xin, Xu, Guowang, van der Greef, Jan, Hankemeier, Thomas

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 814 KB

english, 2008

21

Differential Proteomic Screen To Evidence Proteins Ubiquitinated upon Mitotic Exit in Cell-Free Extract of Xenopus laevis Embryos

Bazile, Franck, Gagné, Jean-Philippe, Mercier, Geneviève, Lo, Ken Sin, Pascal, Aude, Vasilescu, Julian, Figeys, Daniel, Poirier, Guy G., Kubiak, Jacek Z., Chesnel, Franck

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 2.55 MB

english, 2008

22

Estrogen Regulation of Proteins in the Rat Ventromedial Nucleus of the Hypothalamus †

Mo, Bing, Callegari, Eduardo, Telefont, Martin, Renner, Kenneth J.

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 3.78 MB

english, 2008

23

2D Difference Gel Electrophoresis of Prepubertal and Pubertal Rat Mammary Gland Proteomes

Kim, Helen, Cope, Mark B., Herring, Richie, Robinson, Gloria, Wilson, Landon, Page, Grier P., Barnes, Stephen

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 3.83 MB

english, 2008

24

Genome-Based Analysis of Heme Biosynthesis and Uptake in Prokaryotic Systems

Cavallaro, Gabriele, Decaria, Leonardo, Rosato, Antonio

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 1.98 MB

english, 2008

25

Proteomic Comparison between Two Marine Snail Ecotypes Reveals Details about the Biochemistry of Adaptation

Martínez-Fernández, Mónica, Rodríguez-Piñeiro, Ana M., Oliveira, Eliandre, Páez de la Cadena, María, Rolán-Alvarez, Emilio

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 2.90 MB

english, 2008

26

Discovery, Identification, and Characterization of Candidate Pharmacodynamic Markers of Methionine Aminopeptidase-2 Inhibition

Warder, Scott E., Tucker, Lora A., McLoughlin, Shaun M., Strelitzer, Tamara J., Meuth, Joseph L., Zhang, Qian, Sheppard, George S., Richardson, Paul L., Lesniewski, Rick, Davidsen, Steven K., Bell, Ra

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 4.43 MB

english, 2008

27

Studying Protein Phosphorylation in Low MW CSF Fractions with capLC−ICPMS and nanoLC−CHIP-ITMS for Identification of Phosphoproteins

Ellis, Jenny, Grimm, Rudolf, Clark, Joseph F., Pyne-Gaithman, Gail, Wilbur, Steve, Caruso, Joseph A.

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 540 KB

english, 2008

28

Neuropeptidomics of the Supraoptic Rat Nucleus

Bora, Adriana, Annangudi, Suresh P., Millet, Larry J., Rubakhin, Stanislav S., Forbes, Andrew J., Kelleher, Neil L., Gillette, Martha U., Sweedler, Jonathan V.

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 892 KB

english, 2008

29

Proteomic Analysis of Calcium Oxalate Monohydrate Crystal-Induced Cytotoxicity in Distal Renal Tubular Cells

Thongboonkerd, Visith, Semangoen, Theptida, Sinchaikul, Supachok, Chen, Shui-Tein

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 8.08 MB

english, 2008

30

International Summit on Proteomics Data Release and Sharing Policy

Rodriguez, Henry

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 107 KB

english, 2008

31

How does the mammary gland proteome change during puberty?

Cottingham, Katie

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 516 KB

english, 2008

32

Body Cooling Causes Normalization of Cardiac Protein Expression and Function in a Rat Heatstroke Model

Cheng, Bor-Chih, Chang, Ching-Ping, Tsay, Yeou-Guang, Wu, Ting-Feng, Hsu, Chiung-Yueh, Lin, Mao-Tsun

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 3.80 MB

english, 2008

33

The Rate of False Positive Sequence Matches of Peptides Profiled by MALDI MS and Identified by MS/MS

Stoop, Marcel P., Lamers, Robert-Jan A. N., Burgers, Peter C., Sillevis Smitt, Peter A. E., Hintzen, Rogier Q., Luider, Theo M.

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 1.20 MB

english, 2008

34

The Proteomic Response of Saccharomyces cerevisiae in Very High Glucose Conditions with Amino Acid Supplementation

Pham, Trong Khoa, Wright, Phillip C.

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 1.44 MB

english, 2008

35

Characterization of the Human COP9 Signalosome Complex Using Affinity Purification and Mass Spectrometry

Fang, Lei, Wang, Xiaorong, Yamoah, Kosj, Chen, Phang-lang, Pan, Zhen-Qiang, Huang, Lan

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 1.45 MB

english, 2008

36

The Tandem PDZ Protein Syntenin Interacts with the Aminoacyl tRNA Synthetase Complex in a Lysyl-tRNA Synthetase-Dependent Manner

Meerschaert, Kris, Remue, Eline, De Ganck, Ariane, Staes, An, Boucherie, Ciska, Gevaert, Kris, Vandekerckhove, Joël, Kleiman, Lawrence, Gettemans, Jan

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 2.25 MB

english, 2008

37

The Collaboratory for MS3D: A New Cyberinfrastructure for the Structural Elucidation of Biological Macromolecules and Their Assemblies Using Mass Spectrometry-Based Approaches

Yu, Eizadora T., Hawkins, Arie, Kuntz, Irwin D., Rahn, Larry A., Rothfuss, Andrew, Sale, Kenneth, Young, Malin M., Yang, Christine L., Pancerella, Carmen M., Fabris, Daniele

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 5.43 MB

english, 2008

38

Quantitative Analysis of Brain Nuclear Phosphoproteins Identifies Developmentally Regulated Phosphorylation Events

Liao, Lujian, McClatchy, Daniel B., Park, Sung Kyu, Xu, Tao, Lu, Bingwen, Yates, John R.

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 3.19 MB

english, 2008

39

Calendar

Journal:

Journal of Proteome Research

Année:

2008

Fichier:

PDF, 811 KB

2008

40

Shotgun Proteomics of the Haloarchaeon Haloferax volcanii

Kirkland, P. Aaron, Humbard, Matthew A., Daniels, Charles J., Maupin-Furlow, Julie A.

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 229 KB

english, 2008

41

An Optimized MALDI Mass Spectrometry Method for Improved Detection of Lysine/Arginine/Histidine Free Peptides

Argentini, Manuela, Strub, Jean-Marc, Carapito, Christine, Sanglier, Sarah, Van-Dorsselaer, Alain

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 1.85 MB

english, 2008

42

Analysis of the Human Casein Phosphoproteome by 2-D Electrophoresis and MALDI-TOF/TOF MS Reveals New Phosphoforms

Poth, Aaron G., Deeth, Hilton C., Alewood, Paul F., Holland, John W.

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 2.78 MB

english, 2008

43

Differential Membrane Proteomics Using 18 O-Labeling To Identify Biomarkers for Cholangiocarcinoma

Kristiansen, Troels Zakarias, Harsha, H. C., Grønborg, Mads, Maitra, Anirban, Pandey, Akhilesh

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 5.66 MB

english, 2008

44

Proteomic Analysis of Left Ventricular Remodeling in an Experimental Model of Heart Failure

Cieniewski-Bernard, Caroline, Mulder, Paul, Henry, Jean-Paul, Drobecq, Hervé, Dubois, Emilie, Pottiez, Gwënaël, Thuillez, Christian, Amouyel, Philippe, Richard, Vincent, Pinet, Florence

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 3.28 MB

english, 2008

45

Proteomic Analysis of Oxidative Stress-Responsive Proteins in Human Pneumocytes: Insight into the Regulation of DJ-1 Expression

Duan, Xunbao, Kelsen, Steven G., Merali, Salim

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 2.56 MB

english, 2008

46

Screening for EphB Signaling Effectors Using SILAC with a Linear Ion Trap-Orbitrap Mass Spectrometer

Zhang, Guoan, Fenyö, David, Neubert, Thomas A.

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 2.74 MB

english, 2008

47

Lamin A Ser404 Is a Nuclear Target of Akt Phosphorylation in C2C12 Cells

Cenni, Vittoria, Bertacchini, Jessika, Beretti, Francesca, Lattanzi, Giovanna, Bavelloni, Alberto, Riccio, Massimo, Ruzzene, Maria, Marin, Oriano, Arrigoni, Giorgio, Parnaik, Veena, Wehnert, Manfred,

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 4.60 MB

english, 2008

48

Neuropeptidomics study profiles hypothalamic “nucleus”, individual cells

Perkel, Jeffrey M.

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 1.03 MB

english, 2008

49

Comparative Proteomic Analysis Provides New Insights into the Fiber Elongating Process in Cotton

Yang, Yi-Wei, Bian, Shao-Min, Yao, Yuan, Liu, Jin-Yuan

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 5.17 MB

english, 2008

50

High Quality Catalog of Proteotypic Peptides from Human Heart

Kline, Kelli G., Frewen, Barbara, Bristow, Michael R., MacCoss, Michael J., Wu, Christine C.

Journal:

Journal of Proteome Research

Année:

2008

Langue:

english

Fichier:

PDF, 1.93 MB

english, 2008