Volume 6; Issue 8

Journal of Proteome Research

Volume 6; Issue 8

1

Charge Switch Derivatization of Phosphopeptides for Enhanced Surface-Enhanced Raman Spectroscopy and Mass Spectrometry Detection

Li, Handong, Sundararajan, Narayan

Journal:

Journal of Proteome Research

Année:

2007

Langue:

english

Fichier:

PDF, 289 KB

english, 2007

2

Proteomic Variation Is as Large within as between Strawberry Varieties

Alm, Rikard, Ekefjärd, Andreas, Krogh, Morten, Häkkinen, Jari, Emanuelsson, Cecilia

Journal:

Journal of Proteome Research

Année:

2007

Langue:

english

Fichier:

PDF, 318 KB

english, 2007

3

Epithelial Ovarian Cancer: Disease Etiology, Treatment, Detection, and Investigational Gene, Metabolite, and Protein Biomarkers

Williams, Taufika Islam, Toups, Kristina L., Saggese, Diana A., Kalli, Kimberly R., Cliby, William A., Muddiman, David C.

Journal:

Journal of Proteome Research

Année:

2007

Langue:

english

Fichier:

PDF, 1.00 MB

english, 2007

4

Proteomic Analysis of RBC Membrane Protein Degradation during Blood Storage

D'Amici, Gian Maria, Rinalducci, Sara, Zolla, Lello

Journal:

Journal of Proteome Research

Année:

2007

Langue:

english

Fichier:

PDF, 497 KB

english, 2007

5

Comparison of Digestion Protocols for Microgram Quantities of Enriched Protein Samples

Hervey,, Strader, Michael Brad, Hurst, Gregory B.

Journal:

Journal of Proteome Research

Année:

2007

Langue:

english

Fichier:

PDF, 164 KB

english, 2007

6

Characterization of Biomarkers in Polycystic Ovary Syndrome (PCOS) Using Multiple Distinct Proteomic Platforms †

Matharoo-Ball, B., Hughes, C., Lancashire, L., Tooth, D., Ball, G., Creaser, C., Elgasim, M., Rees, R., Layfield, R., Atiomo, W.

Journal:

Journal of Proteome Research

Année:

2007

Langue:

english

Fichier:

PDF, 733 KB

english, 2007

7

Analysis of the Mouse Liver Proteome Using Advanced Mass Spectrometry

Shi, Rong, Kumar, Chanchal, Zougman, Alexandre, Zhang, Yanling, Podtelejnikov, Alexandre, Cox, Jürgen, Wiśniewski, Jacek R., Mann, Matthias

Journal:

Journal of Proteome Research

Année:

2007

Langue:

english

Fichier:

PDF, 267 KB

english, 2007

8

Dynamic Activity of Lipid Droplets: Protein Phosphorylation and GTP-Mediated Protein Translocation

Bartz, René, Zehmer, John K., Zhu, Meifang, Chen, Yue, Serrero, Ginette, Zhao, Yingming, Liu, Pingsheng

Journal:

Journal of Proteome Research

Année:

2007

Langue:

english

Fichier:

PDF, 256 KB

english, 2007

9

A Novel Approach to Identify Proteins Modified by Nitric Oxide: the HIS-TAG Switch Method

Camerini, Serena, Polci, Maria L., Restuccia, Umberto, Usuelli, Vera, Malgaroli, Antonio, Bachi, Angela

Journal:

Journal of Proteome Research

Année:

2007

Langue:

english

Fichier:

PDF, 370 KB

english, 2007

10

N -Glycan Structure Annotation of Glycopeptides Using a Linearized Glycan Structure Database (GlyDB)

Ren, Jian Min, Rejtar, Tomas, Li, Lingyun, Karger, Barry L.

Journal:

Journal of Proteome Research

Année:

2007

Langue:

english

Fichier:

PDF, 628 KB

english, 2007

11

Comprehensive Analysis of Proteins Secreted by Trichophyton rubrum and Trichophyton violaceum under in Vitro Conditions

Giddey, Karin, Monod, Michel, Barblan, Jachen, Potts, Alexandra, Waridel, Patrice, Zaugg, Christophe, Quadroni, Manfredo

Journal:

Journal of Proteome Research

Année:

2007

Langue:

english

Fichier:

PDF, 383 KB

english, 2007

12

Implications of Strain- and Species-Level Sequence Divergence for Community and Isolate Shotgun Proteomic Analysis

Denef, Vincent J., Shah, Manesh B., VerBerkmoes, Nathan C., Hettich, Robert L., Banfield, Jillian F.

Journal:

Journal of Proteome Research

Année:

2007

Langue:

english

Fichier:

PDF, 401 KB

english, 2007

13

Systemic Analysis of Tyrosine Phosphorylated Proteins in Angiopoietin-1 Induced Signaling Pathway of Endothelial Cells

Kim, Young Mee, Seo, Jawon, Kim, Yung Hee, Jeong, Jaeho, Joo, Hye Joon, Lee, Dong-Hee, Koh, Gou Young, Lee, Kong-Joo

Journal:

Journal of Proteome Research

Année:

2007

Langue:

english

Fichier:

PDF, 879 KB

english, 2007

14

Personalized Medicine and Proteomics: Lessons from Non-Small Cell Lung Cancer

Marko-Varga, György, Ogiwara, Atsushi, Nishimura, Toshihide, Kawamura, Takeshi, Fujii, Kiyonaga, Kawakami, Takao, Kyono, Yutaka, Tu, Hsiao-kun, Anyoji, Hisae, Kanazawa, Mitsuhiro, Akimoto, Shingo, Hir

Journal:

Journal of Proteome Research

Année:

2007

Langue:

english

Fichier:

PDF, 561 KB

english, 2007

15

A Probabilistic Treatment of the Missing Spot Problem in 2D Gel Electrophoresis Experiments

Krogh, Morten, Fernandez, Céline, Teilum, Maria, Bengtsson, Sofia, James, Peter

Journal:

Journal of Proteome Research

Année:

2007

Langue:

english

Fichier:

PDF, 208 KB

english, 2007

16

Improved Method for Proteome Mapping of the Liver by 2-DE MALDI-TOF MS

Gazzana, Giuseppe, Borlak, Jürgen

Journal:

Journal of Proteome Research

Année:

2007

Langue:

english

Fichier:

PDF, 545 KB

english, 2007

17

The Need To Characterize and Report the Normal Heterogeneity of Proteins in Clinical Biological Samples

McIntosh, Martin

Journal:

Journal of Proteome Research

Année:

2007

Langue:

english

Fichier:

PDF, 487 KB

english, 2007

18

TOOLbox: UbiProt | mtcPTM | Paragon for peptide identifications | MSNovo | Panoramics | Currents: Studying O-GlcNAc glycosylation in the brain | Phosphopeptide validation strategy | A little heat helps the analysis of membrane proteins | Detection of peanut allergens | Targeted glycoproteomics and glycan site mapping | Protein modifications on a population scale

Journal:

Journal of Proteome Research

Année:

2007

Langue:

english

Fichier:

PDF, 182 KB

english, 2007

19

Proteome Analysis of Desulfovibrio desulfuricans G20 Mutants Using the Accurate Mass and Time (AMT) Tag Approach

Luo, Qingwei, Hixson, Kim K., Callister, Steven J., Lipton, Mary S., Morris, Brandon E. L., Krumholz, Lee R.

Journal:

Journal of Proteome Research

Année:

2007

Langue:

english

Fichier:

PDF, 291 KB

english, 2007

20

Proteomic Analysis of Near-Isogenic Sunflower Varieties Differing in Seed Oil Traits

Hajduch, Martin, Casteel, Jill E., Tang, Shinxue, Hearne, Leonard B., Knapp, Steve, Thelen, Jay J.

Journal:

Journal of Proteome Research

Année:

2007

Langue:

english

Fichier:

PDF, 881 KB

english, 2007

21

Quantitative Proteomics and Protein Network Analysis of Hippocampal Synapses of CaMKIIα Mutant Mice

Li, Ka Wan, Miller, Stephan, Klychnikov, Oleg, Loos, Maarten, Stahl-Zeng, Jianru, Spijker, Sabine, Mayford, Mark, Smit, August B.

Journal:

Journal of Proteome Research

Année:

2007

Langue:

english

Fichier:

PDF, 479 KB

english, 2007

22

New Method for Characterizing Highly Disulfide-Bridged Peptides in Complex Mixtures: Application to Toxin Identification from Crude Venoms

Quinton, Loïc, Demeure, Kevin, Dobson, Rowan, Gilles, Nicolas, Gabelica, Valérie, De Pauw, Edwin

Journal:

Journal of Proteome Research

Année:

2007

Langue:

english

Fichier:

PDF, 374 KB

english, 2007

23

Identification of Differentially Secreted Biomarkers Using LC-MS/MS in Isogenic Cell Lines Representing a Progression of Breast Cancer

Mbeunkui, Flaubert, Metge, Brandon J., Shevde, Lalita A., Pannell, Lewis K.

Journal:

Journal of Proteome Research

Année:

2007

Langue:

english

Fichier:

PDF, 233 KB

english, 2007

24

Protein Expression in the Striatum and Cortex Regions of the Brain for a Mouse Model of Huntington's Disease

Liu, Xiaoyun, Miller, Benjamin R., Rebec, George V., Clemmer, David E.

Journal:

Journal of Proteome Research

Année:

2007

Langue:

english

Fichier:

PDF, 176 KB

english, 2007

25

Diversity of Toxic Components from the Venom of the Evolutionarily Distinct Black Whip Snake, Demansia vestigiata

St Pierre, Liam, Birrell, Geoff W., Earl, Stephen T., Wallis, Tristan P., Gorman, Jeffrey J., de Jersey, John, Masci, Paul P., Lavin, Martin F.

Journal:

Journal of Proteome Research

Année:

2007

Langue:

english

Fichier:

PDF, 2.61 MB

english, 2007

26

Markedly Increased Urinary Preprohaptoglobin and Haptoglobin in Passive Heymann Nephritis: A Differential Proteomics Approach

Ngai, Heidi Hoi-Yee, Sit, Wai-Hung, Jiang, Ping-Ping, Thongboonkerd, Visith, Wan, Jennifer Man-Fan

Journal:

Journal of Proteome Research

Année:

2007

Langue:

english

Fichier:

PDF, 515 KB

english, 2007

27

The New Physician as Unwitting Quantum Mechanic: Is Adapting Dirac's Inference System Best Practice for Personalized Medicine, Genomics, and Proteomics?

Journal:

Journal of Proteome Research

Année:

2007

Langue:

english

Fichier:

PDF, 204 KB

english, 2007

28

An Enzymatic Deglycosylation Scheme Enabling Identification of Core Fucosylated N -Glycans and O-Glycosylation Site Mapping of Human Plasma Proteins

Hägglund, Per, Matthiesen, Rune, Elortza, Felix, Højrup, Peter, Roepstorff, Peter, Jensen, Ole Nørregaard, Bunkenborg, Jakob

Journal:

Journal of Proteome Research

Année:

2007

Langue:

english

Fichier:

PDF, 239 KB

english, 2007

29

Research Profile: Allergic to strawberries? Try a white one

Cottingham, Katie

Journal:

Journal of Proteome Research

Année:

2007

Langue:

english

Fichier:

PDF, 568 KB

english, 2007

30

Proteomic Analysis of Pancreatic Zymogen Granules: Identification of New Granule Proteins

Rindler, Michael J., Xu, Chong-feng, Gumper, Iwona, Smith, Nora N., Neubert, Thomas A.

Journal:

Journal of Proteome Research

Année:

2007

Langue:

english

Fichier:

PDF, 663 KB

english, 2007

31

Multifunctional CMOS Microchip Coatings for Protein and Peptide Arrays

Stadler, Volker, Beyer, Mario, König, Kai, Nesterov, Alexander, Torralba, Gloria, Lindenstruth, Volker, Hausmann, Michael, Bischoff, F. Ralf, Breitling, Frank

Journal:

Journal of Proteome Research

Année:

2007

Langue:

english

Fichier:

PDF, 832 KB

english, 2007

32

New Products

Journal:

Journal of Proteome Research

Année:

2007

Langue:

english

Fichier:

PDF, 270 KB

english, 2007

33

Improving the Diagnostic Accuracy of N-Terminal B-Type Natriuretic Peptide in Human Systolic Heart Failure by Plasma Profiling Using Mass Spectrometry

Jones, Donald J. L., Willingale, Richard, Quinn, Paulene A., Lamb, John H., Farmer, Peter B., Davies, Joan E., Ng, Leong L.

Journal:

Journal of Proteome Research

Année:

2007

Langue:

english

Fichier:

PDF, 252 KB

english, 2007

34

Thyroid-State Influence on Protein-Expression Profile of Rat Skeletal Muscle

Silvestri, Elena, Burrone, Lavinia, de Lange, Pieter, Lombardi, Assunta, Farina, Paola, Chambery, Angela, Parente, Augusto, Lanni, Antonia, Goglia, Fernando, Moreno, Maria

Journal:

Journal of Proteome Research

Année:

2007

Langue:

english

Fichier:

PDF, 442 KB

english, 2007

35

A Differential Phosphoproteomic Analysis of Retinoic Acid-Treated P19 Cells

Smith, Jeffrey C., Duchesne, Marc A., Tozzi, Pascal, Ethier, Martin, Figeys, Daniel

Journal:

Journal of Proteome Research

Année:

2007

Langue:

english

Fichier:

PDF, 709 KB

english, 2007

36

Research Profile: The phosphoproteomics of differentiation

Cottingham, Katie

Journal:

Journal of Proteome Research

Année:

2007

Langue:

english

Fichier:

PDF, 568 KB

english, 2007

37

Proteomic Analysis of Silk Gland Programmed Cell Death during Metamorphosis of the Silkworm Bombyx mori

Jia, Shi-hai, Li, Mu-wang, Zhou, Bo, Liu, Wen-bin, Zhang, Yong, Miao, Xue-xia, Zeng, Rong, Huang, Yong-ping

Journal:

Journal of Proteome Research

Année:

2007

Langue:

english

Fichier:

PDF, 420 KB

english, 2007

38

Within-Day Reproducibility of an HPLC−MS-Based Method for Metabonomic Analysis: Application to Human Urine

Gika, Helen G., Theodoridis, Georgios A., Wingate, Julia E., Wilson, Ian D.

Journal:

Journal of Proteome Research

Année:

2007

Langue:

english

Fichier:

PDF, 637 KB

english, 2007

39

Research Profile: Express proteomics of the mouse liver

Cassiday, Laura

Journal:

Journal of Proteome Research

Année:

2007

Langue:

english

Fichier:

PDF, 743 KB

english, 2007

40

Identification of Vascular Surface Proteins by in Vivo Biotinylation: A Method Sufficiently Sensitive To Detect Changes in Rat Liver 2 Weeks after Partial Hepatectomy

McCann, Lauren A., Haywood, Miriam C., Ren, Bin Hai, Simpson, Ann M., Guilhaus, Michael, Wasinger, Valerie C., Raftery, Mark J., Davey, Ross A.

Journal:

Journal of Proteome Research

Année:

2007

Langue:

english

Fichier:

PDF, 402 KB

english, 2007

41

De Novo Mass Spectrometry Sequencing and Characterization of Species-Specific Peptides from Nucleoside Diphosphate Kinase B for the Classification of Commercial Fish Species Belonging to the Family Merlucciidae

Carrera, Mónica, Cañas, Benito, Piñeiro, Carmen, Vázquez, Jesús, Gallardo, José Manuel

Journal:

Journal of Proteome Research

Année:

2007

Langue:

english

Fichier:

PDF, 590 KB

english, 2007

42

Calendar

Journal:

Journal of Proteome Research

Année:

2007

Langue:

english

Fichier:

PDF, 74 KB

english, 2007

43

New Candidate Targets of AMP-Activated Protein Kinase in Murine Brain Revealed by a Novel Multidimensional Substrate-Screen for Protein Kinases

Tuerk, Roland D., Thali, Ramon F., Auchli, Yolanda, Rechsteiner, Helene, Brunisholz, René A., Schlattner, Uwe, Wallimann, Theo, Neumann, Dietbert

Journal:

Journal of Proteome Research

Année:

2007

Langue:

english

Fichier:

PDF, 866 KB

english, 2007

44

Government & Society: NIH peer review under the microscope | HUPO PSI announces formal document review processes | Knockout mouse repository

Journal:

Journal of Proteome Research

Année:

2007

Langue:

english

Fichier:

PDF, 720 KB

english, 2007

45

A Controversial Tumor Marker: Is SM22 a Proper Biomarker for Gastric Cancer Cells?

Li, Na, Zhang, Jun, Liang, Yumei, Shao, Jianmin, Peng, Fuli, Sun, Maomao, Xu, Ningzhi, Li, Xianghong, Wang, Rong, Liu, Siqi, Lu, Youyong

Journal:

Journal of Proteome Research

Année:

2007

Langue:

english

Fichier:

PDF, 808 KB

english, 2007

46

Analysis of Whole Cell Lysate from the Intercellular Bacterium Coxiella burnetii Using Two Gel-Based Protein Separation Techniques

Samoilis, Georgios, Psaroulaki, Anna, Vougas, Konstantinos, Tselentis, Yannis, Tsiotis, Georgios

Journal:

Journal of Proteome Research

Année:

2007

Langue:

english

Fichier:

PDF, 469 KB

english, 2007

47

Proteomic Analysis of Activity-Dependent Synaptic Plasticity in Hippocampal Neurons

Piccoli, Giovanni, Verpelli, Chiara, Tonna, Noemi, Romorini, Stefano, Alessio, Massimo, Nairn, Angus C., Bachi, Angela, Sala, Carlo

Journal:

Journal of Proteome Research

Année:

2007

Langue:

english

Fichier:

PDF, 1.25 MB

english, 2007

48

Ion Trap Collisional Activation of c and z • Ions Formed via Gas-Phase Ion/Ion Electron-Transfer Dissociation

Han, Hongling, Xia, Yu, McLuckey, Scott A.

Journal:

Journal of Proteome Research

Année:

2007

Langue:

english

Fichier:

PDF, 259 KB

english, 2007