Volume 4; Issue 3

Journal of Proteome Research

Volume 4; Issue 3

1

Mass Spectrometric Analysis of the Schistosoma mansoni Tegumental Sub-proteome

van Balkom, Bas W. M., van Gestel, Renske A., Brouwers, Jos F. H. M., Krijgsveld, Jeroen, Tielens, Aloysius G. M., Heck, Albert J. R., van Hellemond, Jaap J.

Journal:

Journal of Proteome Research

Année:

2005

Langue:

english

Fichier:

PDF, 340 KB

english, 2005

2

Quantitative Proteome Analysis Using Differential Stable Isotopic Labeling and Microbore LC−MALDI MS and MS/MS

Ji, Chengjie, Li, Liang

Journal:

Journal of Proteome Research

Année:

2005

Langue:

english

Fichier:

PDF, 356 KB

english, 2005

3

Identification of Mycobacterium tuberculosis H37Rv Integral Membrane Proteins by One-Dimensional Gel Electrophoresis and Liquid Chromatography Electrospray Ionization Tandem Mass Spectrometry

Xiong, Ying, Chalmers, Michael J., Gao, Fei Philip, Cross, Timothy A., Marshall, Alan G.

Journal:

Journal of Proteome Research

Année:

2005

Langue:

english

Fichier:

PDF, 224 KB

english, 2005

4

Optimal Replication and the Importance of Experimental Design for Gel-Based Quantitative Proteomics

Hunt, Sybille M. N., Thomas, Mervyn R., Sebastian, Lucille T., Pedersen, Susanne K., Harcourt, Rebecca L., Sloane, Andrew J., Wilkins, Marc R.

Journal:

Journal of Proteome Research

Année:

2005

Langue:

english

Fichier:

PDF, 427 KB

english, 2005

5

Proteome Analysis of Primary Neurons and Astrocytes from Rat Cerebellum

Yang, Jae-Won, Rodrigo, Regina, Felipo, Vicente, Lubec, Gert

Journal:

Journal of Proteome Research

Année:

2005

Langue:

english

Fichier:

PDF, 572 KB

english, 2005

6

Integrated Approach for Manual Evaluation of Peptides Identified by Searching Protein Sequence Databases with Tandem Mass Spectra

Chen, Yue, Kwon, Sung Won, Kim, Sung Chan, Zhao, Yingming

Journal:

Journal of Proteome Research

Année:

2005

Langue:

english

Fichier:

PDF, 193 KB

english, 2005

7

In Vivo Dual-Tagging Proteomic Approach in Studying Signaling Pathways in Immune Response

Wang, Tianyi, Gu, Sheng, Ronni, Tapani, Du, Yu-Chun, Chen, Xian

Journal:

Journal of Proteome Research

Année:

2005

Langue:

english

Fichier:

PDF, 501 KB

english, 2005

8

Protein Profiling of Human Pancreatic Islets by Two-Dimensional Gel Electrophoresis and Mass Spectrometry

Ahmed, Meftun, Forsberg, Jens, Bergsten, Peter

Journal:

Journal of Proteome Research

Année:

2005

Langue:

english

Fichier:

PDF, 300 KB

english, 2005

9

Comparative Analysis of the ADAM and ADAMTS Families

Andreini, Claudia, Banci, Lucia, Bertini, Ivano, Elmi, Sara, Rosato, Antonio

Journal:

Journal of Proteome Research

Année:

2005

Langue:

english

Fichier:

PDF, 1.06 MB

english, 2005

10

Replaceable Cross-Linked Polyacrylamide for High Performance Separation of Proteins

Lu, Joann J., Liu, Shaorong, Pu, Qiaosheng

Journal:

Journal of Proteome Research

Année:

2005

Langue:

english

Fichier:

PDF, 157 KB

english, 2005

11

Evaluation of Protein Depletion Methods for the Analysis of Total-, Phospho- and Glycoproteins in Lumbar Cerebrospinal Fluid

Ogata, Yuko, Charlesworth, M. Cristine, Muddiman, David C.

Journal:

Journal of Proteome Research

Année:

2005

Langue:

english

Fichier:

PDF, 463 KB

english, 2005

12

Infrared Mass Spectrometric Imaging below the Diffraction Limit

Luxembourg, Stefan L., McDonnell, Liam A., Mize, Todd H., Heeren, Ron M. A.

Journal:

Journal of Proteome Research

Année:

2005

Langue:

english

Fichier:

PDF, 110 KB

english, 2005

13

Sequence Similarity-Based Proteomics in Insects: Characterization of the Larvae Venom of the Brazilian Moth Cerodirphia s peciosa

Shevchenko, Anna, Leal de Sousa, Mirta Mittelstedt, Waridel, Patrice, Bittencourt, Silvia Tolfo, Valle de Sousa, Marcelo, Shevchenko, Andrej

Journal:

Journal of Proteome Research

Année:

2005

Langue:

english

Fichier:

PDF, 234 KB

english, 2005

14

Differential Protein Expression Profiles of Gastric Epithelial Cells Following Helicobacter p ylori Infection Using ProteinChips

Das, Soumita, Sierra, Johanna C., Soman, Kizhake V., Suarez, Giovanni, Mohammad, Amin A., Dang, Tu Anh T., Luxon, Bruce A., Reyes, Victor E.

Journal:

Journal of Proteome Research

Année:

2005

Langue:

english

Fichier:

PDF, 820 KB

english, 2005

15

Meeting News: Have biomarkers, will validate | Phosphorylation on a global scale

Cottingham, Katie, Mukhopadhyay, Rajendrani

Journal:

Journal of Proteome Research

Année:

2005

Langue:

english

Fichier:

PDF, 94 KB

english, 2005

16

Quantitation of de Novo Localized 15 N-Labeled Lipoproteins and Membrane Proteins Having One and Two Transmembrane Segments in a Bacillus subtilis secA Temperature-Sensitive Mutant Using 2D-PAGE and MALDI-TOF MS

Bunai, Keigo, Nozaki, Manabu, Kakeshita, Hiroshi, Nemoto, Tadashi, Yamane, Kunio

Journal:

Journal of Proteome Research

Année:

2005

Langue:

english

Fichier:

PDF, 373 KB

english, 2005

17

Robust Method for Proteome Analysis by MS/MS Using an Entire Translated Genome: Demonstration on the Ciliome of Tetrahymena t hermophila

Smith, Jeffrey C., Northey, Julian G. B., Garg, Jyoti, Pearlman, Ronald E., Siu, K. W. Michael

Journal:

Journal of Proteome Research

Année:

2005

Langue:

english

Fichier:

PDF, 1.25 MB

english, 2005

18

Global Whole-Cell FTICR Mass Spectrometric Proteomics Analysis of the Heat Shock Response in the Radioresistant Bacterium Deinococcus r adiodurans

Schmid, Amy K., Lipton, Mary S., Mottaz, Heather, Monroe, Matthew E., Smith, Richard D., Lidstrom, Mary E.

Journal:

Journal of Proteome Research

Année:

2005

Langue:

english

Fichier:

PDF, 122 KB

english, 2005

19

Global Protein Shotgun Expression Profiling of Proliferating MCF-7 Breast Cancer Cells

Sandhu, Charanjit, Connor, Michael, Kislinger, Thomas, Slingerland, Joyce, Emili, Andrew

Journal:

Journal of Proteome Research

Année:

2005

Langue:

english

Fichier:

PDF, 422 KB

english, 2005

20

Characterization of Purified c- Type Heme-Containing Peptides and Identification of c- Type Heme-Attachment Sites in Shewanella o neidenis Cytochromes Using Mass Spectrometry

Yang, Feng, Bogdanov, Bogdan, Strittmatter, Eric F., Vilkov, Andrey N., Gritsenko, Marina, Shi, Liang, Elias, Dwayne A., Ni, Shuisong, Romine, Margaret, Paša-Tolić, Ljiljana, Lipton, Mary S., Smith, R

Journal:

Journal of Proteome Research

Année:

2005

Langue:

english

Fichier:

PDF, 189 KB

english, 2005

21

Direct Tandem Mass Spectrometry Reveals Limitations in Protein Profiling Experiments for Plasma Biomarker Discovery

Koomen, John M., Li, Donghui, Xiao, Lian-chun, Liu, Thomas C., Coombes, Kevin R., Abbruzzese, James, Kobayashi, Ryuji

Journal:

Journal of Proteome Research

Année:

2005

Langue:

english

Fichier:

PDF, 260 KB

english, 2005

22

Postfractionation for Enhanced Proteomic Analyses: Routine Electrophoretic Methods Increase the Resolution of Standard 2D-PAGE

Butt, R. Hussain, Coorssen, Jens R.

Journal:

Journal of Proteome Research

Année:

2005

Langue:

english

Fichier:

PDF, 432 KB

english, 2005

23

Predicting Enzyme Subclass by Functional Domain Composition and Pseudo Amino Acid Composition

Cai, Yu-Dong, Chou, Kuo-Chen

Journal:

Journal of Proteome Research

Année:

2005

Langue:

english

Fichier:

PDF, 97 KB

english, 2005

24

Afamin Is a Novel Human Vitamin E-Binding Glycoprotein Characterization and In Vitro Expression

Jerkovic, Lidija, Voegele, Andreas F., Chwatal, Sabine, Kronenberg, Florian, Radcliffe, Catherine M., Wormald, Mark R., Lobentanz, Eva M., Ezeh, Benjie, Eller, Patricia, Dejori, Norbert, Dieplinger, B

Journal:

Journal of Proteome Research

Année:

2005

Langue:

english

Fichier:

PDF, 552 KB

english, 2005

25

Integrative Proteomics: Functional and Molecular Characterization of a Particular Glutamate-Related Neuregulin Isoform

Schillo, Simone, Pejović, Vojislav, Hunzinger, Christian, Hansen, Torsten, Poznanović, Slobodan, Kriegsmann, Jörg, Schmidt, Werner J., Schrattenholz, André

Journal:

Journal of Proteome Research

Année:

2005

Langue:

english

Fichier:

PDF, 491 KB

english, 2005

26

Determination of Relative Protein Abundance by Internally Normalized Ratio Algorithm with Antibody Arrays

Andersson, Oskar, Kozlowski, Mark, Garachtchenko, Tatiana, Nikoloff, Corina, Lew, Nancy, Litman, David J., Chaga, Grigoriy

Journal:

Journal of Proteome Research

Année:

2005

Langue:

english

Fichier:

PDF, 336 KB

english, 2005

27

Primordial Proteins and HIVPart II

Sommer, Andrei P.

Journal:

Journal of Proteome Research

Année:

2005

Langue:

english

Fichier:

PDF, 83 KB

english, 2005

28

Peptide Identification Using Vectors of Small Fragment Ions

Cittaro, Davide, Borsotti, Dario, Maiolica, Alessio, Argenzio, Elisabetta, Rappsilber, Juri

Journal:

Journal of Proteome Research

Année:

2005

Langue:

english

Fichier:

PDF, 151 KB

english, 2005

29

Global Proteome Discovery Using an Online Three-Dimensional LC−MS/MS

Wei, Jing, Sun, Jun, Yu, Wen, Jones, Arianna, Oeller, Paul, Keller, Martin, Woodnutt, Gary, Short, Jay M.

Journal:

Journal of Proteome Research

Année:

2005

Langue:

english

Fichier:

PDF, 248 KB

english, 2005

30

Identification of Proteins Expressing Differences among Isolates of Meloidogyne spp . (Nematoda: Meloidogynidae) by Nano-Liquid Chromatography Coupled to Ion-Trap Mass Spectrometry

Calvo, E., Flores-Romero, P., López, J. A., Navas, A.

Journal:

Journal of Proteome Research

Année:

2005

Langue:

english

Fichier:

PDF, 315 KB

english, 2005

31

Comparative Analysis of the Tear Protein Expression in Blepharitis Patients Using Two-Dimensional Electrophoresis

Koo, Bon-Suk, Lee, Do-Yeon, Ha, Hyo-Shin, Kim, Jae-Chan, Kim, Chan-Wha

Journal:

Journal of Proteome Research

Année:

2005

Langue:

english

Fichier:

PDF, 446 KB

english, 2005

32

Proteomic Profiling of Erythrocyte Proteins by Proteolytic Digestion Chip and Identification Using Two-Dimensional Electrospray Ionization Tandem Mass Spectrometry

Tyan, Yu-Chang, Jong, Shiang-Bin, Liao, Jiunn-Der, Liao, Pao-Chi, Yang, Ming-Hui, Liu, Chia-Yuan, Klauser, Ruth, Himmelhaus, Michael, Grunze, Michael

Journal:

Journal of Proteome Research

Année:

2005

Langue:

english

Fichier:

PDF, 212 KB

english, 2005

33

Hints of the Post-Proteome Era

Hancock, William S.

Journal:

Journal of Proteome Research

Année:

2005

Langue:

english

Fichier:

PDF, 40 KB

english, 2005

34

Improved Protein Identification through the Use of Unstained Gels

Loiselle, David R., Thelin, William R., Parker, Carol E., Dicheva, Nedyalka N., Kesner, Barry A., Mocanu, Viorel, Wang, Frank, Milgram, Sharon L., Warren, Maria R. Esteban, Borchers, Christoph H.

Journal:

Journal of Proteome Research

Année:

2005

Langue:

english

Fichier:

PDF, 201 KB

english, 2005

35

Diagnostic Potential of Tear Proteomic Patterns in Sjögren's Syndrome

Tomosugi, Naohisa, Kitagawa, Kazuko, Takahashi, Nobuo, Sugai, Susumu, Ishikawa, Isao

Journal:

Journal of Proteome Research

Année:

2005

Langue:

english

Fichier:

PDF, 155 KB

english, 2005

36

Government and Society: EuPO changes name to EuPA | Proteomics reveals effects of aquaculture on fish

Erickson, Britt E.

Journal:

Journal of Proteome Research

Année:

2005

Langue:

english

Fichier:

PDF, 71 KB

english, 2005

37

Organelle Proteomics of Rat Synaptic Proteins: Correlation-Profiling by Isotope-Coded Affinity Tagging in Conjunction with Liquid Chromatography-Tandem Mass Spectrometry to Reveal Post-synaptic Density Specific Proteins

Li, Ka wan, Hornshaw, Martin P., van Minnen, Jan, Smalla, Karl-Heinz, Gundelfinger, Eckart D., Smit, August B.

Journal:

Journal of Proteome Research

Année:

2005

Langue:

english

Fichier:

PDF, 187 KB

english, 2005

38

Direct MS/MS Analysis of Proteins Blotted on Membranes by a Matrix-Assisted Laser Desorption/Ionization-Quadrupole Ion Trap-Time-of-Flight Tandem Mass Spectrometer

Nakanishi, Tsuyoshi, Ohtsu, Iwao, Furuta, Masaru, Ando, Eiji, Nishimura, Osamu

Journal:

Journal of Proteome Research

Année:

2005

Langue:

english

Fichier:

PDF, 195 KB

english, 2005

39

MultiProtIdent: Identifying Proteins Using Database Search and Protein−Protein Interactions

Huang, Hsien-Da, Lee, Tzong-Yi, Wu, Li-Cheng, Lin, Feng-Mao, Juan, Hsueh-Fen, Horng, Jorng-Tzong, Tsou, Ann-Ping

Journal:

Journal of Proteome Research

Année:

2005

Langue:

english

Fichier:

PDF, 259 KB

english, 2005

40

Proteomic Studies on Low- and High-Grade Human Brain Astrocytomas

Odreman, Federico, Vindigni, Marco, Gonzales, Marlen Lujardo, Niccolini, Benedetta, Candiano, Giovanni, Zanotti, Bruno, Skrap, Miran, Pizzolitto, Stefano, Stanta, Giorgio, Vindigni, Alessandro

Journal:

Journal of Proteome Research

Année:

2005

Langue:

english

Fichier:

PDF, 949 KB

english, 2005

41

New Products

Journal:

Journal of Proteome Research

Année:

2005

Langue:

english

Fichier:

PDF, 40 KB

english, 2005

42

Meetings

Journal:

Journal of Proteome Research

Année:

2005

Langue:

english

Fichier:

PDF, 41 KB

english, 2005

43

Differential Expression of Proteins in Response to Ceramide-Mediated Stress Signal in Colon Cancer Cells by 2-D Gel Electrophoresis and MALDI-TOF−MS

Fillet, M., Cren-Olivé, C., Renert, A.-F., Piette, J., Vandermoere, F., Rolando, Ch., Merville, M-P.

Journal:

Journal of Proteome Research

Année:

2005

Langue:

english

Fichier:

PDF, 402 KB

english, 2005

44

Human salivary proteome | Chromatography and ionization on a single surface | In-capillary proteolysis | Isolating membrane proteins | Low-abundance proteins in hemodialysis fluid | High-temperature 2-D LC | Gel-free activity-based profiling | New protein cross-linking agents | Quantitation of protein phosphorylation | p I shifts aid PTM identification | Fluorous proteomics

Journal:

Journal of Proteome Research

Année:

2005

Langue:

english

Fichier:

PDF, 142 KB

english, 2005

45

Study of Ligand−Receptor Binding Using SPME: Investigation of Receptor, Free, and Total Ligand Concentrations

Musteata, Florin Marcel, Pawliszyn, Janusz

Journal:

Journal of Proteome Research

Année:

2005

Langue:

english

Fichier:

PDF, 236 KB

english, 2005

46

Tagging-via-Substrate Strategy for Probing O-GlcNAc Modified Proteins

Sprung, Robert, Nandi, Animesh, Chen, Yue, Kim, Sung Chan, Barma, Deb, Falck, John R., Zhao, Yingming

Journal:

Journal of Proteome Research

Année:

2005

Langue:

english

Fichier:

PDF, 242 KB

english, 2005

47

Research Profiles: Designing a powerful 2DE experiment 7 Tears hold clues to eye disease

Cottingham, Katie, Erickson, Britt E.

Journal:

Journal of Proteome Research

Année:

2005

Langue:

english

Fichier:

PDF, 81 KB

english, 2005