Volume 16; Issue 4

Journal of Proteome Research

Volume 16; Issue 4

1

Label-Free Neuroproteomics of the Hippocampal-Accumbal Circuit Reveals Deficits in Neurotransmitter and Neuropeptide Signaling in Mice Lacking Ethanol-Sensitive Adenosine Transporter

Oliveros, Alfredo, Starski, Phillip, Lindberg, Daniel, Choi, Sun, Heppelmann, Carrie J., Dasari, Surendra, Choi, Doo-Sup

Journal:

Journal of Proteome Research

Année:

2017

Langue:

english

Fichier:

PDF, 4.67 MB

english, 2017

2

Urinary 1 H Nuclear Magnetic Resonance Metabolomic Fingerprinting Reveals Biomarkers of Pulse Consumption Related to Energy-Metabolism Modulation in a Subcohort from the PREDIMED study

Madrid-Gambin, Francisco, Llorach, Rafael, Vázquez-Fresno, Rosa, Urpi-Sarda, Mireia, Almanza-Aguilera, Enrique, Garcia-Aloy, Mar, Estruch, Ramon, Corella, Dolores, Andres-Lacueva, Cristina

Journal:

Journal of Proteome Research

Année:

2017

Langue:

english

Fichier:

PDF, 1.02 MB

english, 2017

3

A Shotgun Proteomics Approach Reveals a New Toxic Role for Alzheimer’s Disease Aβ Peptide: Spliceosome Impairment

Nuzzo, Domenico, Inguglia, Luigi, Walters, Jessica, Picone, Pasquale, Di Carlo, Marta

Journal:

Journal of Proteome Research

Année:

2017

Langue:

english

Fichier:

PDF, 2.67 MB

english, 2017

4

Discovery of Novel Antimicrobial Peptides from Varanus komodoensis (Komodo Dragon) by Large-Scale Analyses and De-Novo-Assisted Sequencing Using Electron-Transfer Dissociation Mass Spectrometry

Bishop, Barney M., Juba, Melanie L., Russo, Paul S., Devine, Megan, Barksdale, Stephanie M., Scott, Shaylyn, Settlage, Robert, Michalak, Pawel, Gupta, Kajal, Vliet, Kent, Schnur, Joel M., van Hoek, Mo

Journal:

Journal of Proteome Research

Année:

2017

Langue:

english

Fichier:

PDF, 1.31 MB

english, 2017

5

Metabolomics-Based Elucidation of Active Metabolic Pathways in Erythrocytes and HSC-Derived Reticulocytes

Srivastava, Anubhav, Evans, Krystal J., Sexton, Anna E., Schofield, Louis, Creek, Darren J.

Journal:

Journal of Proteome Research

Année:

2017

Langue:

english

Fichier:

PDF, 3.73 MB

english, 2017

6

Multiplexed Phosphoproteomic Profiling Using Titanium Dioxide and Immunoaffinity Enrichments Reveals Complementary Phosphorylation Events

Possemato, Anthony P., Paulo, Joao A., Mulhern, Daniel, Guo, Ailan, Gygi, Steven P., Beausoleil, Sean A.

Journal:

Journal of Proteome Research

Année:

2017

Langue:

english

Fichier:

PDF, 5.67 MB

english, 2017

7

Cartilaginous Metabolomic Study Reveals Potential Mechanisms of Osteophyte Formation in Osteoarthritis

Xu, Zhongwei, Chen, Tingmei, Luo, Jiao, Ding, Shijia, Gao, Sichuan, Zhang, Jian

Journal:

Journal of Proteome Research

Année:

2017

Langue:

english

Fichier:

PDF, 1.45 MB

english, 2017

8

Blood Proteomic Profiling in Inherited (ATTRm) and Acquired (ATTRwt) Forms of Transthyretin-Associated Cardiac Amyloidosis

Chan, Gloria G., Koch, Clarissa M., Connors, Lawreen H.

Journal:

Journal of Proteome Research

Année:

2017

Langue:

english

Fichier:

PDF, 615 KB

english, 2017

9

Assessment of Label-Free Quantification in Discovery Proteomics and Impact of Technological Factors and Natural Variability of Protein Abundance

Al Shweiki, MHD Rami, Mönchgesang, Susann, Majovsky, Petra, Thieme, Domenika, Trutschel, Diana, Hoehenwarter, Wolfgang

Journal:

Journal of Proteome Research

Année:

2017

Langue:

english

Fichier:

PDF, 1.28 MB

english, 2017

10

Large-Scale Identification of Protein Crotonylation Reveals Its Role in Multiple Cellular Functions

Wei, Wei, Mao, Anqi, Tang, Bin, Zeng, Qiufang, Gao, Shennan, Liu, Xiaoguang, Lu, Lu, Li, Wenpeng, Du, James X., Li, Jiwen, Wong, Jiemin, Liao, Lujian

Journal:

Journal of Proteome Research

Année:

2017

Langue:

english

Fichier:

PDF, 3.45 MB

english, 2017

11

Quantitative Proteomic and Phosphoproteomic Analysis of H37Ra and H37Rv Strains of Mycobacterium tuberculosis

Verma, Renu, Pinto, Sneha Maria, Patil, Arun Hanumana, Advani, Jayshree, Subba, Pratigya, Kumar, Manish, Sharma, Jyoti, Dey, Gourav, Ravikumar, Raju, Buggi, Shashidhar, Satishchandra, Parthasarathy, S

Journal:

Journal of Proteome Research

Année:

2017

Langue:

english

Fichier:

PDF, 3.50 MB

english, 2017

12

Quantitative Proteomic Analysis of Serum Exosomes from Patients with Locally Advanced Pancreatic Cancer Undergoing Chemoradiotherapy

An, Mingrui, Lohse, Ines, Tan, Zhijing, Zhu, Jianhui, Wu, Jing, Kurapati, Himabindu, Morgan, Meredith A., Lawrence, Theodore S., Cuneo, Kyle C., Lubman, David M.

Journal:

Journal of Proteome Research

Année:

2017

Langue:

english

Fichier:

PDF, 2.03 MB

english, 2017

13

Glycosylation Changes in Serum Proteins Identify Patients with Pancreatic Cancer

Drabik, Anna, Bodzon-Kulakowska, Anna, Suder, Piotr, Silberring, Jerzy, Kulig, Jan, Sierzega, Marek

Journal:

Journal of Proteome Research

Année:

2017

Langue:

english

Fichier:

PDF, 1019 KB

english, 2017

14

1 H NMR To Evaluate the Metabolome of Bronchoalveolar Lavage Fluid (BALf) in Bronchiolitis Obliterans Syndrome (BOS): Toward the Development of a New Approach for Biomarker Identification

Ciaramelli, Carlotta, Fumagalli, Marco, Viglio, Simona, Bardoni, Anna Maria, Piloni, Davide, Meloni, Federica, Iadarola, Paolo, Airoldi, Cristina

Journal:

Journal of Proteome Research

Année:

2017

Langue:

english

Fichier:

PDF, 2.44 MB

english, 2017

15

Development of IsoTaG, a Chemical Glycoproteomics Technique for Profiling Intact N- and O-Glycopeptides from Whole Cell Proteomes

Woo, Christina M., Felix, Alejandra, Byrd, William E., Zuegel, Devon K., Ishihara, Mayumi, Azadi, Parastoo, Iavarone, Anthony T., Pitteri, Sharon J., Bertozzi, Carolyn R.

Journal:

Journal of Proteome Research

Année:

2017

Langue:

english

Fichier:

PDF, 4.22 MB

english, 2017

16

Impact of the Pd 2 Spermine Chelate on Osteosarcoma Metabolism: An NMR Metabolomics Study

Lamego, Inês, Marques, M. Paula M., Duarte, Iola F., Martins, Ana S., Oliveira, Helena, Gil, Ana M.

Journal:

Journal of Proteome Research

Année:

2017

Langue:

english

Fichier:

PDF, 1.31 MB

english, 2017

17

Metabolic in Vivo Labeling Highlights Differences of Metabolically Active Microbes from the Mucosal Gastrointestinal Microbiome between High-Fat and Normal Chow Diet

Oberbach, Andreas, Haange, Sven-Bastiaan, Schlichting, Nadine, Heinrich, Marco, Lehmann, Stefanie, Till, Holger, Hugenholtz, Floor, Kullnick, Yvonne, Smidt, Hauke, Frank, Karin, Seifert, Jana, Jehmlic

Journal:

Journal of Proteome Research

Année:

2017

Langue:

english

Fichier:

PDF, 1.51 MB

english, 2017

18

Optimization and Application of Direct Infusion Nanoelectrospray HRMS Method for Large-Scale Urinary Metabolic Phenotyping in Molecular Epidemiology

Chekmeneva, Elena, dos Santos Correia, Gonçalo, Chan, Queenie, Wijeyesekera, Anisha, Tin, Adrienne, Young, Jeffery Hunter, Elliott, Paul, Nicholson, Jeremy K., Holmes, Elaine

Journal:

Journal of Proteome Research

Année:

2017

Langue:

english

Fichier:

PDF, 1.13 MB

english, 2017

19

Deep-Learning-Based Drug–Target Interaction Prediction

Wen, Ming, Zhang, Zhimin, Niu, Shaoyu, Sha, Haozhi, Yang, Ruihan, Yun, Yonghuan, Lu, Hongmei

Journal:

Journal of Proteome Research

Année:

2017

Langue:

english

Fichier:

PDF, 1.99 MB

english, 2017

20

Param-Medic: A Tool for Improving MS/MS Database Search Yield by Optimizing Parameter Settings

May, Damon H., Tamura, Kaipo, Noble, William S.

Journal:

Journal of Proteome Research

Année:

2017

Langue:

english

Fichier:

PDF, 867 KB

english, 2017

21

Identification of Sequence Similarities among Isomerization Hotspots in Crystallin Proteins

Lyon, Yana A., Sabbah, Georgette M., Julian, Ryan R.

Journal:

Journal of Proteome Research

Année:

2017

Langue:

english

Fichier:

PDF, 4.60 MB

english, 2017

22

Proteomic Assessment of the Expression of Genes Related to Toluene Catabolism and Porin Synthesis in Pseudomonas stutzeri ST-9

Michael, Esti, Gomila, Margarita, Lalucat, Jorge, Nitzan, Yeshayahu, Pechatnikov, Izabella, Cahan, Rivka

Journal:

Journal of Proteome Research

Année:

2017

Langue:

english

Fichier:

PDF, 1.59 MB

english, 2017

23

Branched-Chain Amino Acids as Predictors for Individual Differences of Cisplatin Nephrotoxicity in Rats: A Pharmacometabonomics Study

Zhang, Pei, Li, Wei, Chen, Jiaqing, Li, Ruiting, Zhang, Zunjian, Huang, Yin, Xu, Fengguo

Journal:

Journal of Proteome Research

Année:

2017

Langue:

english

Fichier:

PDF, 1.84 MB

english, 2017

24

Quantitative Proteomic Analysis of Human Airway Cilia Identifies Previously Uncharacterized Proteins of High Abundance

Blackburn, Kevin, Bustamante-Marin, Ximena, Yin, Weining, Goshe, Michael B., Ostrowski, Lawrence E.

Journal:

Journal of Proteome Research

Année:

2017

Langue:

english

Fichier:

PDF, 2.39 MB

english, 2017

25

Missing Value Monitoring Enhances the Robustness in Proteomics Quantitation

Matafora, Vittoria, Corno, Andrea, Ciliberto, Andrea, Bachi, Angela

Journal:

Journal of Proteome Research

Année:

2017

Langue:

english

Fichier:

PDF, 1.44 MB

english, 2017

26

Alterations in the Salivary Proteome and N -Glycome of Sjögren’s Syndrome Patients

Hall, Steven C., Hassis, Maria E., Williams, Katherine E., Albertolle, Matthew E., Prakobphol, Akraporn, Dykstra, Andrew B., Laurance, Megan, Ona, Katherine, Niles, Richard K., Prasad, Namrata, Gormle

Journal:

Journal of Proteome Research

Année:

2017

Langue:

english

Fichier:

PDF, 14.94 MB

english, 2017

27

NMR-Based Lipid Profiling of High Density Lipoprotein Particles in Healthy Subjects with Low, Normal, and Elevated HDL-Cholesterol

Kostara, Christina E., Tsimihodimos, Vasilis, Elisaf, Moses S., Bairaktari, Eleni T.

Journal:

Journal of Proteome Research

Année:

2017

Langue:

english

Fichier:

PDF, 725 KB

english, 2017

28

Identifications of Putative PKA Substrates with Quantitative Phosphoproteomics and Primary-Sequence-Based Scoring

Imamura, Haruna, Wagih, Omar, Niinae, Tomoya, Sugiyama, Naoyuki, Beltrao, Pedro, Ishihama, Yasushi

Journal:

Journal of Proteome Research

Année:

2017

Langue:

english

Fichier:

PDF, 1.65 MB

english, 2017

29

Glycoproteins in Claudin-Low Breast Cancer Cell Lines Have a Unique Expression Profile

Yen, Ten-Yang, Bowen, Spencer, Yen, Roger, Piryatinska, Alexandra, Macher, Bruce A., Timpe, Leslie C.

Journal:

Journal of Proteome Research

Année:

2017

Langue:

english

Fichier:

PDF, 745 KB

english, 2017

30

Combined Clinical Phenotype and Lipidomic Analysis Reveals the Impact of Chronic Kidney Disease on Lipid Metabolism

Chen, Hua, Chen, Lin, Liu, Dan, Chen, Dan-Qian, Vaziri, Nosratola D., Yu, Xiao-Yong, Zhang, Li, Su, Wei, Bai, Xu, Zhao, Ying-Yong

Journal:

Journal of Proteome Research

Année:

2017

Langue:

english

Fichier:

PDF, 2.07 MB

english, 2017

31

Large-Scale SRM Screen of Urothelial Bladder Cancer Candidate Biomarkers in Urine

Duriez, Elodie, Masselon, Christophe D., Mesmin, Cédric, Court, Magali, Demeure, Kevin, Allory, Yves, Malats, Núria, Matondo, Mariette, Radvanyi, François, Garin, Jérôme, Domon, Bruno

Journal:

Journal of Proteome Research

Année:

2017

Langue:

english

Fichier:

PDF, 1.08 MB

english, 2017

32

Quantification of Metabolites by NMR Spectroscopy in the Presence of Protein

Wallmeier, Jens, Samol, Claudia, Ellmann, Lisa, Zacharias, Helena U., Vogl, Franziska C., Garcia, Muriel, Dettmer, Katja, Oefner, Peter J., Gronwald, Wolfram

Journal:

Journal of Proteome Research

Année:

2017

Langue:

english

Fichier:

PDF, 710 KB

english, 2017

33

Intrauterine Growth Restriction Programs the Hypothalamus of Adult Male Rats: Integrated Analysis of Proteomic and Metabolomic Data

Pedroso, Amanda P., Souza, Adriana P., Dornellas, Ana P. S., Oyama, Lila M., Nascimento, Cláudia M. O., Santos, Gianni M. S., Rosa, José C., Bertolla, Ricardo P., Klawitter, Jelena, Christians, Uwe, T

Journal:

Journal of Proteome Research

Année:

2017

Langue:

english

Fichier:

PDF, 732 KB

english, 2017

34

Systems Biology Reveals NS4B-Cyclophilin A Interaction: A New Target to Inhibit YFV Replication

Vidotto, Alessandra, Morais, Ana T. S., Ribeiro, Milene R., Pacca, Carolina C., Terzian, Ana C. B., Gil, Laura H. V. G., Mohana-Borges, Ronaldo, Gallay, Philippe, Nogueira, Mauricio L.

Journal:

Journal of Proteome Research

Année:

2017

Langue:

english

Fichier:

PDF, 2.08 MB

english, 2017

35

Brachyspira hyodysenteriae Infection Regulates Mucin Glycosylation Synthesis Inducing an Increased Expression of Core-2 O -Glycans in Porcine Colon

Venkatakrishnan, Vignesh, Quintana-Hayashi, Macarena P., Mahu, Maxime, Haesebrouck, Freddy, Pasmans, Frank, Lindén, Sara K.

Journal:

Journal of Proteome Research

Année:

2017

Langue:

english

Fichier:

PDF, 2.41 MB

english, 2017

36

MHC-I Ligand Discovery Using Targeted Database Searches of Mass Spectrometry Data: Implications for T-Cell Immunotherapies

Murphy, J. Patrick, Konda, Prathyusha, Kowalewski, Daniel J., Schuster, Heiko, Clements, Derek, Kim, Youra, Cohen, Alejandro M., Sharif, Tanveer, Nielsen, Morten, Stevanovic, Stefan, Lee, Patrick W.,

Journal:

Journal of Proteome Research

Année:

2017

Langue:

english

Fichier:

PDF, 3.49 MB

english, 2017

37

Innovation’s Mean Free Path

Journal:

Journal of Proteome Research

Année:

2017

Langue:

english

Fichier:

PDF, 190 KB

english, 2017

38

Scrambled Internal Standard Method for High-Throughput Protein Quantification by Matrix-Assisted Laser Desorption Ionization Tandem Mass Spectrometry

Yoneyama, Toshihiro, Ohtsuki, Sumio, Tachikawa, Masanori, Uchida, Yasuo, Terasaki, Tetsuya

Journal:

Journal of Proteome Research

Année:

2017

Langue:

english

Fichier:

PDF, 2.06 MB

english, 2017

39

Issue Publication Information

Journal:

Journal of Proteome Research

Année:

2017

Langue:

english

Fichier:

PDF, 171 KB

english, 2017

40

Issue Editorial Masthead

Journal:

Journal of Proteome Research

Année:

2017

Langue:

english

Fichier:

PDF, 159 KB

english, 2017