Volume 14; Issue 7

Journal of Proteome Research

Volume 14; Issue 7

1

PIA: An Intuitive Protein Inference Engine with a Web-Based User Interface

Uszkoreit, Julian, Maerkens, Alexandra, Perez-Riverol, Yasset, Meyer, Helmut E., Marcus, Katrin, Stephan, Christian, Kohlbacher, Oliver, Eisenacher, Martin

Journal:

Journal of Proteome Research

Année:

2015

Langue:

english

Fichier:

PDF, 1.70 MB

english, 2015

2

High-Resolution Mass Spectrometry Based Proteomic Analysis of the Response to Vancomycin-Induced Cell Wall Stress in Streptomyces coelicolor A3(2)

Hesketh, Andy, Deery, Michael J., Hong, Hee-Jeon

Journal:

Journal of Proteome Research

Année:

2015

Langue:

english

Fichier:

PDF, 1003 KB

english, 2015

3

Immunoproteomic Profiling of Bordetella pertussis Outer Membrane Vesicle Vaccine Reveals Broad and Balanced Humoral Immunogenicity

Raeven, René H. M., van der Maas, Larissa, Tilstra, Wichard, Uittenbogaard, Joost P., Bindels, Tim H. E., Kuipers, Betsy, van der Ark, Arno, Pennings, Jeroen L. A., van Riet, Elly, Jiskoot, Wim, Kerst

Journal:

Journal of Proteome Research

Année:

2015

Langue:

english

Fichier:

PDF, 4.13 MB

english, 2015

4

A Combined Shotgun and Targeted Mass Spectrometry Strategy for Breast Cancer Biomarker Discovery

Sjöström, Martin, Ossola, Reto, Breslin, Thomas, Rinner, Oliver, Malmström, Lars, Schmidt, Alexander, Aebersold, Ruedi, Malmström, Johan, Niméus, Emma

Journal:

Journal of Proteome Research

Année:

2015

Langue:

english

Fichier:

PDF, 1.26 MB

english, 2015

5

Proteomic Analysis of Phosphoproteins in the Rice Nucleus During the Early Stage of Seed Germination

Li, Ming, Yin, Xiaojian, Sakata, Katsumi, Yang, Pingfang, Komatsu, Setsuko

Journal:

Journal of Proteome Research

Année:

2015

Langue:

english

Fichier:

PDF, 2.15 MB

english, 2015

6

Discovery and Longitudinal Evaluation of Candidate Protein Biomarkers for Disease Recurrence in Prostate Cancer

Tonry, Claire L., Doherty, Darren, O’Shea, Carmel, Morrissey, Brian, Staunton, Lisa, Flatley, Brian, Shannon, Aoife, Armstrong, John, Pennington, Stephen R.

Journal:

Journal of Proteome Research

Année:

2015

Langue:

english

Fichier:

PDF, 3.58 MB

english, 2015

7

NextSearch: A Search Engine for Mass Spectrometry Data against a Compact Nucleotide Exon Graph

Kim, Hyunwoo, Park, Heejin, Paek, Eunok

Journal:

Journal of Proteome Research

Année:

2015

Langue:

english

Fichier:

PDF, 1.52 MB

english, 2015

8

Proteomics of Important Food Crops in the Asia Oceania Region: Current Status and Future Perspectives

Chakraborty, Subhra, Salekdeh, Ghasem Hosseini, Yang, Pingfang, Woo, Sun Hee, Chin, Chiew Foan, Gehring, Chris, Haynes, Paul A., Mirzaei, Mehdi, Komatsu, Setsuko

Journal:

Journal of Proteome Research

Année:

2015

Langue:

english

Fichier:

PDF, 911 KB

english, 2015

9

Signal Transduction Reaction Monitoring Deciphers Site-Specific PI3K-mTOR/MAPK Pathway Dynamics in Oncogene-Induced Senescence

de Graaf, Erik L., Kaplon, Joanna, Mohammed, Shabaz, Vereijken, Lisette A. M., Duarte, Daniel P., Redondo Gallego, Laura, Heck, Albert J. R., Peeper, Daniel S., Altelaar, A. F. Maarten

Journal:

Journal of Proteome Research

Année:

2015

Langue:

english

Fichier:

PDF, 2.53 MB

english, 2015

10

Construction and Deciphering of Human Phosphorylation-Mediated Signaling Transduction Networks

Zhang, Menghuan, Li, Hong, He, Ying, Sun, Han, Xia, Li, Wang, Lishun, Sun, Bo, Ma, Liangxiao, Zhang, Guoqing, Li, Jing, Li, Yixue, Xie, Lu

Journal:

Journal of Proteome Research

Année:

2015

Langue:

english

Fichier:

PDF, 1.85 MB

english, 2015

11

Vav1 Regulates T-Cell Activation through a Feedback Mechanism and Crosstalk between the T-Cell Receptor and CD28

Helou, Ynes A., Petrashen, Anna P., Salomon, Arthur R.

Journal:

Journal of Proteome Research

Année:

2015

Langue:

english

Fichier:

PDF, 1.49 MB

english, 2015

12

Defining the Adipose Tissue Proteome of Dairy Cows to Reveal Biomarkers Related to Peripartum Insulin Resistance and Metabolic Status

Journal:

Journal of Proteome Research

Année:

2015

Langue:

english

Fichier:

PDF, 1.23 MB

english, 2015

13

Identification of Plasma Metabolites Prognostic of Acute Kidney Injury after Cardiac Surgery with Cardiopulmonary Bypass

Zacharias, Helena U., Hochrein, Jochen, Vogl, Franziska C., Schley, Gunnar, Mayer, Friederike, Jeleazcov, Christian, Eckardt, Kai-Uwe, Willam, Carsten, Oefner, Peter J., Gronwald, Wolfram

Journal:

Journal of Proteome Research

Année:

2015

Langue:

english

Fichier:

PDF, 802 KB

english, 2015

14

Improving Blood Plasma Glycoproteome Coverage by Coupling Ultracentrifugation Fractionation to Electrostatic Repulsion–Hydrophilic Interaction Chromatography Enrichment

Adav, Sunil S., Hwa, Ho Hee, de Kleijn, Dominique, Sze, Siu Kwan

Journal:

Journal of Proteome Research

Année:

2015

Langue:

english

Fichier:

PDF, 1.64 MB

english, 2015

15

A Comparison of Methods To Enhance Protein Detection of Lipoproteins by Mass Spectrometry

Heink, Anna, Davidson, W. Sean, Swertfeger, Debi K., Lu, L. Jason, Shah, Amy S.

Journal:

Journal of Proteome Research

Année:

2015

Langue:

english

Fichier:

PDF, 1018 KB

english, 2015

16

Sample Collection Method Bias Effects in Quantitative Phosphoproteomics

Kanshin, Evgeny, Tyers, Michael, Thibault, Pierre

Journal:

Journal of Proteome Research

Année:

2015

Langue:

english

Fichier:

PDF, 912 KB

english, 2015

17

Identification of the Protective Role of DJ-1 in Hypoglycemic Astrocyte Injury Using Proteomics

Deng, Jiangshan, Zhao, Fei, Yu, Xiaoyan, Li, Dawei, Zhao, Yuwu

Journal:

Journal of Proteome Research

Année:

2015

Langue:

english

Fichier:

PDF, 2.68 MB

english, 2015

18

A Cluster of Proteins Implicated in Kidney Disease Is Increased in High-Density Lipoprotein Isolated from Hemodialysis Subjects

Shao, Baohai, de Boer, Ian, Tang, Chongren, Mayer, Philip S., Zelnick, Leila, Afkarian, Maryam, Heinecke, Jay W., Himmelfarb, Jonathan

Journal:

Journal of Proteome Research

Année:

2015

Langue:

english

Fichier:

PDF, 1.97 MB

english, 2015

19

Alterations in Human Liver Metabolome during Prolonged Cryostorage

Abuja, Peter M., Ehrhart, Friederike, Schoen, Uwe, Schmidt, Tomm, Stracke, Frank, Dallmann, Guido, Friedrich, Torben, Zimmermann, Heiko, Zatloukal, Kurt

Journal:

Journal of Proteome Research

Année:

2015

Langue:

english

Fichier:

PDF, 6.07 MB

english, 2015

20

Allostasis and Resilience of the Human Individual Metabolic Phenotype

Ghini, Veronica, Saccenti, Edoardo, Tenori, Leonardo, Assfalg, Michael, Luchinat, Claudio

Journal:

Journal of Proteome Research

Année:

2015

Langue:

english

Fichier:

PDF, 3.85 MB

english, 2015

21

Molecular Portrait of Breast-Cancer-Derived Cell Lines Reveals Poor Similarity with Tumors

Cifani, Paolo, Kirik, Ufuk, Waldemarson, Sofia, James, Peter

Journal:

Journal of Proteome Research

Année:

2015

Langue:

english

Fichier:

PDF, 1.54 MB

english, 2015

22

Comprehensive Metabolic Profiling of Age-Related Mitochondrial Dysfunction in the High-Fat-Fed ob / ob Mouse Heart

Wang, Xinzhu, West, James A., Murray, Andrew J., Griffin, Julian L.

Journal:

Journal of Proteome Research

Année:

2015

Langue:

english

Fichier:

PDF, 3.82 MB

english, 2015

23

Characterization of the Glycosylation Site of Human PSA Prompted by Missense Mutation using LC–MS/MS

Song, Ehwang, Hu, Yunli, Hussein, Ahmed, Yu, Chuan-Yih, Tang, Haixu, Mechref, Yehia

Journal:

Journal of Proteome Research

Année:

2015

Langue:

english

Fichier:

PDF, 4.54 MB

english, 2015

24

Spatial Organization in Protein Kinase A Signaling Emerged at the Base of Animal Evolution

Peng, Mao, Aye, Thin Thin, Snel, Berend, van Breukelen, Bas, Scholten, Arjen, Heck, Albert J. R.

Journal:

Journal of Proteome Research

Année:

2015

Langue:

english

Fichier:

PDF, 4.16 MB

english, 2015

25

Correction to “Pregnancy-Induced Metabolic Phenotype Variations in Maternal Plasma”

Luan, Hemi, Meng, Nan, Liu, Ping, Feng, Qiang, Lin, Shuhai, Fu, Jin, Davidson, Robert, Chen, Xiaomin, Rao, Weiqiao, Chen, Fang, Jiang, Hui, Xu, Xun, Cai, Zongwei, Wang, Jun

Journal:

Journal of Proteome Research

Année:

2015

Langue:

english

Fichier:

PDF, 120 KB

english, 2015