Volume 13; Issue 8

Journal of Proteome Research

Volume 13; Issue 8

1

Multiplexed MRM with Internal Standards for Cerebrospinal Fluid Candidate Protein Biomarker Quantitation

Percy, Andrew J., Yang, Juncong, Chambers, Andrew G., Simon, Romain, Hardie, Darryl B., Borchers, Christoph H.

Journal:

Journal of Proteome Research

Année:

2014

Langue:

english

Fichier:

PDF, 999 KB

english, 2014

2

Phosphoproteomic Approach to Characterize Protein Mono- and Poly(ADP-ribosyl)ation Sites from Cells

Daniels, Casey M., Ong, Shao-En, Leung, Anthony K. L.

Journal:

Journal of Proteome Research

Année:

2014

Langue:

english

Fichier:

PDF, 11.56 MB

english, 2014

3

Mass++: A Visualization and Analysis Tool for Mass Spectrometry

Tanaka, Satoshi, Fujita, Yuichiro, Parry, Howell E., Yoshizawa, Akiyasu C., Morimoto, Kentaro, Murase, Masaki, Yamada, Yoshihiro, Yao, Jingwen, Utsunomiya, Shin-ichi, Kajihara, Shigeki, Fukuda, Mitsur

Journal:

Journal of Proteome Research

Année:

2014

Langue:

english

Fichier:

PDF, 701 KB

english, 2014

4

Cell Surface Proteome Analysis of Human-Hosted Trypanosoma cruzi Life Stages

Queiroz, Rayner M. L., Charneau, Sébastien, Bastos, Izabela M. D., Santana, Jaime M., Sousa, Marcelo V., Roepstorff, Peter, Ricart, Carlos A. O.

Journal:

Journal of Proteome Research

Année:

2014

Langue:

english

Fichier:

PDF, 1.20 MB

english, 2014

5

Verification of a Parkinson’s Disease Protein Signature in T-Lymphocytes by Multiple Reaction Monitoring

Alberio, Tiziana, McMahon, Kelly, Cuccurullo, Manuela, Gethings, Lee A., Lawless, Craig, Zibetti, Maurizio, Lopiano, Leonardo, Vissers, Johannes P. C., Fasano, Mauro

Journal:

Journal of Proteome Research

Année:

2014

Langue:

english

Fichier:

PDF, 659 KB

english, 2014

6

Metabolomics Reveals Inflammatory-Linked Pulmonary Metabolic Alterations in a Murine Model of House Dust Mite-Induced Allergic Asthma

Ho, Wanxing Eugene, Xu, Yong-Jiang, Cheng, Chang, Peh, Hong Yong, Tannenbaum, Steven R., Wong, W. S. Fred, Ong, Choon Nam

Journal:

Journal of Proteome Research

Année:

2014

Langue:

english

Fichier:

PDF, 1.07 MB

english, 2014

7

Stable Isotope-Labeled Collagen: A Novel and Versatile Tool for Quantitative Collagen Analyses Using Mass Spectrometry

Taga, Yuki, Kusubata, Masashi, Ogawa-Goto, Kiyoko, Hattori, Shunji

Journal:

Journal of Proteome Research

Année:

2014

Langue:

english

Fichier:

PDF, 299 KB

english, 2014

8

Detection of Dichlorvos Adducts in a Hepatocyte Cell Line

Bui-Nguyen, Tri M., Dennis, William E., Jackson, David A., Stallings, Jonathan D., Lewis, John A.

Journal:

Journal of Proteome Research

Année:

2014

Langue:

english

Fichier:

PDF, 2.28 MB

english, 2014

9

Proteomic View of Basement Membranes from Human Retinal Blood Vessels, Inner Limiting Membranes, and Lens Capsules

Uechi, Guy, Sun, Zhiyuan, Schreiber, Emanuel M., Halfter, Willi, Balasubramani, Manimalha

Journal:

Journal of Proteome Research

Année:

2014

Langue:

english

Fichier:

PDF, 2.98 MB

english, 2014

10

MS Amanda, a Universal Identification Algorithm Optimized for High Accuracy Tandem Mass Spectra

Dorfer, Viktoria, Pichler, Peter, Stranzl, Thomas, Stadlmann, Johannes, Taus, Thomas, Winkler, Stephan, Mechtler, Karl

Journal:

Journal of Proteome Research

Année:

2014

Langue:

english

Fichier:

PDF, 978 KB

english, 2014

11

Proteome Analysis of the Inner Integument from Developing Jatropha curcas L. Seeds

Soares, Emanoella L., Shah, Mohibullah, Soares, Arlete A., Costa, José H., Carvalho, Paulo, Domont, Gilberto B., Nogueira, Fábio C. S., Campos, Francisco A. P.

Journal:

Journal of Proteome Research

Année:

2014

Langue:

english

Fichier:

PDF, 1.39 MB

english, 2014

12

Important Role of SUMOylation of Spliceosome Factors in Prostate Cancer Cells

Wen, Donghua, Xu, Zhijian, Xia, Li, Liu, Xinyi, Tu, Yaoyao, Lei, Hu, Wang, Weiwei, Wang, Tongdan, Song, Lili, Ma, Chunmin, Xu, Hanzhang, Zhu, Weiliang, Chen, Guoqiang, Wu, Yingli

Journal:

Journal of Proteome Research

Année:

2014

Langue:

english

Fichier:

PDF, 2.51 MB

english, 2014

13

Large-Scale Proteome Quantification of Hepatocellular Carcinoma Tissues by a Three-Dimensional Liquid Chromatography Strategy Integrated with Sample Preparation

Xu, Bo, Wang, Fangjun, Song, Chunxia, Sun, Zhen, Cheng, Kai, Tan, Yexiong, Wang, Hongyang, Zou, Hanfa

Journal:

Journal of Proteome Research

Année:

2014

Langue:

english

Fichier:

PDF, 3.15 MB

english, 2014

14

Proteogenomic Analysis of the Venturia pirina (Pear Scab Fungus) Secretome Reveals Potential Effectors

Cooke, Ira R., Jones, Dan, Bowen, Joanna K., Deng, Cecilia, Faou, Pierre, Hall, Nathan E., Jayachandran, Vignesh, Liem, Michael, Taranto, Adam P., Plummer, Kim M., Mathivanan, Suresh

Journal:

Journal of Proteome Research

Année:

2014

Langue:

english

Fichier:

PDF, 1.39 MB

english, 2014

15

Comprehensive and Scalable Highly Automated MS-Based Proteomic Workflow for Clinical Biomarker Discovery in Human Plasma

Dayon, Loïc, Núñez Galindo, Antonio, Corthésy, John, Cominetti, Ornella, Kussmann, Martin

Journal:

Journal of Proteome Research

Année:

2014

Langue:

english

Fichier:

PDF, 2.21 MB

english, 2014

16

Identification and Quantitation of Coding Variants and Isoforms of Pulmonary Surfactant Protein A

Foster, Matthew W., Thompson, J. Will, Ledford, Julie G., Dubois, Laura G., Hollingsworth, John W., Francisco, Dave, Tanyaratsrisakul, Sasipa, Voelker, Dennis R., Kraft, Monica, Moseley, M. Arthur, Fo

Journal:

Journal of Proteome Research

Année:

2014

Langue:

english

Fichier:

PDF, 2.80 MB

english, 2014

17

Investigating RET RTK Signaling Pathways Using an IAP-Based Activity-Profiling Approach

Höfener, Michael, Pachl, Fiona, Take, Tim, Fischer von Mollard, Gabriele, Kuster, Bernhard, Sewald, Norbert

Journal:

Journal of Proteome Research

Année:

2014

Langue:

english

Fichier:

PDF, 2.10 MB

english, 2014

18

Genomics and Proteomics Provide New Insight into the Commensal and Pathogenic Lifestyles of Bovine- and Human-Associated Staphylococcus epidermidis Strains

Savijoki, Kirsi, Iivanainen, Antti, Siljamäki, Pia, Laine, Pia K., Paulin, Lars, Karonen, Taru, Pyörälä, Satu, Kankainen, Matti, Nyman, Tuula A., Salomäki, Tiina, Koskinen, Patrik, Holm, Liisa, Simojo

Journal:

Journal of Proteome Research

Année:

2014

Langue:

english

Fichier:

PDF, 5.46 MB

english, 2014

19

Brain Proteome Changes Induced by Olfactory Learning in Drosophila

Zhang, Yaoyang, Shan, Bing, Boyle, Monica, Liu, Jacqueline, Liao, Lujian, Xu, Tao, Yates, John R.

Journal:

Journal of Proteome Research

Année:

2014

Langue:

english

Fichier:

PDF, 3.84 MB

english, 2014

20

Off-Line Multidimensional Liquid Chromatography and Auto Sampling Result in Sample Loss in LC/LC–MS/MS

Magdeldin, Sameh, Moresco, James J., Yamamoto, Tadashi, Yates, John R.

Journal:

Journal of Proteome Research

Année:

2014

Langue:

english

Fichier:

PDF, 4.54 MB

english, 2014

21

Method Development for the Detection of Human Myostatin by High-Resolution and Targeted Mass Spectrometry

Peiris, Hassendrini Nileishika, Ashman, Keith, Vaswani, Kanchan, Kvaskoff, David, Rice, Gregory Edward, Mitchell, Murray David

Journal:

Journal of Proteome Research

Année:

2014

Langue:

english

Fichier:

PDF, 1.41 MB

english, 2014

22

Enhancing the Biological Relevance of Secretome-Based Proteomics by Linking Tumor Cell Proliferation and Protein Secretion

Gregori, Josep, Méndez, Olga, Katsila, Theodora, Pujals, Mireia, Salvans, Cándida, Villarreal, Laura, Arribas, Joaquin, Tabernero, Josep, Sánchez, Alex, Villanueva, Josep

Journal:

Journal of Proteome Research

Année:

2014

Langue:

english

Fichier:

PDF, 4.89 MB

english, 2014

23

Proteomic Analysis of the EWS-Fli-1 Interactome Reveals the Role of the Lysosome in EWS-Fli-1 Turnover

Elzi, David J., Song, Meihua, Hakala, Kevin, Weintraub, Susan T., Shiio, Yuzuru

Journal:

Journal of Proteome Research

Année:

2014

Langue:

english

Fichier:

PDF, 1.66 MB

english, 2014

24

Salt Stress-Induced Alterations in the Root Proteome of Amaranthus cruentus L.

Huerta-Ocampo, José A., Barrera-Pacheco, Alberto, Mendoza-Hernández, Christian S., Espitia-Rangel, Eduardo, Mock, Hans-Peter, Barba de la Rosa, Ana P.

Journal:

Journal of Proteome Research

Année:

2014

Langue:

english

Fichier:

PDF, 6.58 MB

english, 2014

25

Analyzing the First Drafts of the Human Proteome

Ezkurdia, Iakes, Vázquez, Jesús, Valencia, Alfonso, Tress, Michael

Journal:

Journal of Proteome Research

Année:

2014

Langue:

english

Fichier:

PDF, 238 KB

english, 2014

26

Quantitative Proteome Profiling of CNS-Infiltrating Autoreactive CD4 + Cells Reveals Selective Changes during Experimental Autoimmune Encephalomyelitis

Turvey, Michelle E., Koudelka, Tomas, Comerford, Iain, Greer, Judith M., Carroll, William, Bernard, Claude C. A., Hoffmann, Peter, McColl, Shaun R.

Journal:

Journal of Proteome Research

Année:

2014

Langue:

english

Fichier:

PDF, 7.75 MB

english, 2014

27

Intestinal Amino Acid Availability via PEPT-1 Affects TORC1/2 Signaling and the Unfolded Protein Response

Geillinger, Kerstin E., Kuhlmann, Katja, Eisenacher, Martin, Giesbertz, Pieter, Meyer, Helmut E., Daniel, Hannelore, Spanier, Britta

Journal:

Journal of Proteome Research

Année:

2014

Langue:

english

Fichier:

PDF, 2.24 MB

english, 2014

28

Proteome Adaptation of Saccharomyces cerevisiae to Severe Calorie Restriction in Retentostat Cultures

Binai, Nadine A., Bisschops, Markus M. M., van Breukelen, Bas, Mohammed, Shabaz, Loeff, Luuk, Pronk, Jack T., Heck, Albert J. R., Daran-Lapujade, Pascale, Slijper, Monique

Journal:

Journal of Proteome Research

Année:

2014

Langue:

english

Fichier:

PDF, 1.71 MB

english, 2014

29

Characterization of Protein Serotonylation via Bioorthogonal Labeling and Enrichment

Lin, Jason Ching-Yao, Chou, Chi-Chi, Tu, Zhijay, Yeh, Lun-Fu, Wu, Shang-Chuen, Khoo, Kay-Hooi, Lin, Chun-Hung

Journal:

Journal of Proteome Research

Année:

2014

Langue:

english

Fichier:

PDF, 2.41 MB

english, 2014

30

Metabolomic Profiling of Autoimmune Hepatitis: The Diagnostic Utility of Nuclear Magnetic Resonance Spectroscopy

Wang, Jia-bo, Pu, Shi-biao, Sun, Ying, Li, Zhong-feng, Niu, Ming, Yan, Xian-zhong, Zhao, Yan-ling, Wang, Li-feng, Qin, Xue-mei, Ma, Zhi-jie, Zhang, Ya-ming, Li, Bao-sen, Luo, Sheng-qiang, Gong, Man, S

Journal:

Journal of Proteome Research

Année:

2014

Langue:

english

Fichier:

PDF, 2.39 MB

english, 2014

31

Analysis of Candidate Genes for Lineage-Specific Expression Changes in Humans and Primates

Lindskog, Cecilia, Kuhlwilm, Martin, Davierwala, Armaity, Fu, Ning, Hegde, Geeta, Uhlén, Mathias, Navani, Sanjay, Pääbo, Svante, Pontén, Fredrik

Journal:

Journal of Proteome Research

Année:

2014

Langue:

english

Fichier:

PDF, 6.04 MB

english, 2014

32

Discovery of Chromatin-Associated Proteins via Sequence-Specific Capture and Mass Spectrometric Protein Identification in Saccharomyces cerevisiae

Kennedy-Darling, Julia, Guillen-Ahlers, Hector, Shortreed, Michael R., Scalf, Mark, Frey, Brian L., Kendziorski, Christina, Olivier, Michael, Gasch, Audrey P., Smith, Lloyd M.

Journal:

Journal of Proteome Research

Année:

2014

Langue:

english

Fichier:

PDF, 4.35 MB

english, 2014

33

Next Generation of Food Allergen Quantification Using Mass Spectrometric Systems

Koeberl, Martina, Clarke, Dean, Lopata, Andreas L.

Journal:

Journal of Proteome Research

Année:

2014

Langue:

english

Fichier:

PDF, 2.98 MB

english, 2014