Volume 11; Issue 1

Journal of Proteome Research

Volume 11; Issue 1

1

We Are What We Eat: Food Safety and Proteomics

D’Alessandro, Angelo, Zolla, Lello

Journal:

Journal of Proteome Research

Année:

2012

Langue:

english

Fichier:

PDF, 974 KB

english, 2012

2

Mechanisms of Plant Salt Response: Insights from Proteomics

Zhang, Heng, Han, Bing, Wang, Tai, Chen, Sixue, Li, Haiying, Zhang, Yuhong, Dai, Shaojun

Journal:

Journal of Proteome Research

Année:

2012

Langue:

english

Fichier:

PDF, 5.83 MB

english, 2012

3

Proteome Turnover in the Green Alga Ostreococcus tauri by Time Course 15 N Metabolic Labeling Mass Spectrometry

Martin, Sarah F., Munagapati, Vijaya S., Salvo-Chirnside, Eliane, Kerr, Lorraine E., Le Bihan, Thierry

Journal:

Journal of Proteome Research

Année:

2012

Langue:

english

Fichier:

PDF, 3.12 MB

english, 2012

4

Targeted Quantitative Phosphoproteomics Approach for the Detection of Phospho-tyrosine Signaling in Plants

Mithoe, Sharon C., Boersema, Paul J., Berke, Lidija, Snel, Berend, Heck, Albert J. R., Menke, Frank L. H.

Journal:

Journal of Proteome Research

Année:

2012

Langue:

english

Fichier:

PDF, 910 KB

english, 2012

5

Plant Cell Organelle Proteomics in Response to Abiotic Stress

Hossain, Zahed, Nouri, Mohammad-Zaman, Komatsu, Setsuko

Journal:

Journal of Proteome Research

Année:

2012

Langue:

english

Fichier:

PDF, 1018 KB

english, 2012

6

Application of Spiroplasma melliferum Proteogenomic Profiling for the Discovery of Virulence Factors and Pathogenicity Mechanisms in Host-associated Spiroplasmas

Alexeev, Dmitry, Kostrjukova, Elena, Aliper, Alexander, Popenko, Anna, Bazaleev, Nikolay, Tyakht, Alexander, Selezneva, Oksana, Akopian, Tatyana, Prichodko, Elena, Kondratov, Ilya, Chukin, Mikhail, De

Journal:

Journal of Proteome Research

Année:

2012

Langue:

english

Fichier:

PDF, 1.16 MB

english, 2012

7

Shotgun Proteomic Analysis of Long-distance Drought Signaling in Rice Roots

Mirzaei, Mehdi, Soltani, Neda, Sarhadi, Elham, Pascovici, Dana, Keighley, Tim, Salekdeh, Ghasem Hosseini, Haynes, Paul A., Atwell, Brian J.

Journal:

Journal of Proteome Research

Année:

2012

Langue:

english

Fichier:

PDF, 2.15 MB

english, 2012

8

Characterization of the Mycobacterium tuberculosis Proteome by Liquid Chromatography Mass Spectrometry-based Proteomics Techniques: A Comprehensive Resource for Tuberculosis Research

Bell, Christina, Smith, Geoffrey T., Sweredoski, Michael J., Hess, Sonja

Journal:

Journal of Proteome Research

Année:

2012

Langue:

english

Fichier:

PDF, 2.58 MB

english, 2012

9

Contribution of Proteomics to the Study of Plant Pathogenic Fungi

Gonzalez-Fernandez, Raquel, Jorrin-Novo, Jesus V.

Journal:

Journal of Proteome Research

Année:

2012

Langue:

english

Fichier:

PDF, 2.89 MB

english, 2012

10

New Insights into Staphylococcus aureus Stress Tolerance and Virulence Regulation from an Analysis of the Role of the ClpP Protease in the Strains Newman, COL, and SA564

Frees, Dorte, Andersen, Julie Hove, Hemmingsen, Lene, Koskenniemi, Kerttu, Bæk, Kristoffer T., Muhammed, Musemma Kedir, Gudeta, Dereje Dadi, Nyman, Tuula A., Sukura, Antti, Varmanen, Pekka, Savijoki,

Journal:

Journal of Proteome Research

Année:

2012

Langue:

english

Fichier:

PDF, 3.00 MB

english, 2012

11

Prospective on Mycobacterium tuberculosis Proteomics

Mehaffy, M. Carolina, Kruh-Garcia, Nicole A., Dobos, Karen M.

Journal:

Journal of Proteome Research

Année:

2012

Langue:

english

Fichier:

PDF, 2.63 MB

english, 2012

12

Identification of Phosphoproteins in Arabidopsis thaliana Leaves Using Polyethylene Glycol Fractionation, Immobilized Metal-ion Affinity Chromatography, Two-Dimensional Gel Electrophoresis and Mass Spectrometry

Aryal, Uma K., Krochko, Joan E., Ross, Andrew R. S.

Journal:

Journal of Proteome Research

Année:

2012

Langue:

english

Fichier:

PDF, 2.85 MB

english, 2012

13

Microbial Proteomics

Junqueira, Magno, Domont, Gilberto

Journal:

Journal of Proteome Research

Année:

2012

Langue:

english

Fichier:

PDF, 109 KB

english, 2012

14

A Proteomic Survey of Nonribosomal Peptide and Polyketide Biosynthesis in Actinobacteria

Chen, Yunqiu, Ntai, Ioanna, Ju, Kou-San, Unger, Michelle, Zamdborg, Leonid, Robinson, Sarah J., Doroghazi, James R., Labeda, David P., Metcalf, William W., Kelleher, Neil L.

Journal:

Journal of Proteome Research

Année:

2012

Langue:

english

Fichier:

PDF, 2.52 MB

english, 2012

15

Characterization of β-Lactamase Enzyme Activity in Bacterial Lysates using MALDI-Mass Spectrometry

Hooff, Gero P., van Kampen, Jeroen J. A., Meesters, Roland J. W., van Belkum, Alex, Goessens, Wil H. F., Luider, Theo M.

Journal:

Journal of Proteome Research

Année:

2012

Langue:

english

Fichier:

PDF, 1.11 MB

english, 2012

16

Defining the Boundaries and Characterizing the Landscape of Functional Genome Expression in Vascular Tissues of Populus using Shotgun Proteomics

Abraham, Paul, Adams, Rachel, Giannone, Richard J., Kalluri, Udaya, Ranjan, Priya, Erickson, Brian, Shah, Manesh, Tuskan, Gerald A., Hettich, Robert L.

Journal:

Journal of Proteome Research

Année:

2012

Langue:

english

Fichier:

PDF, 2.46 MB

english, 2012

17

Differential Metabolic Regulation Governed by the Rice SUB1A Gene during Submergence Stress and Identification of Alanylglycine by 1 H NMR Spectroscopy

Barding, Gregory A., Fukao, Takeshi, Béni, Szabolcs, Bailey-Serres, Julia, Larive, Cynthia K.

Journal:

Journal of Proteome Research

Année:

2012

Langue:

english

Fichier:

PDF, 2.00 MB

english, 2012

18

Efficacy of IgG and F(ab′) 2 Antivenoms to Neutralize Snake Venom-induced Local Tissue Damage as Assessed by the Proteomic Analysis of Wound Exudate

Rucavado, Alexandra, Escalante, Teresa, Shannon, John D., Ayala-Castro, Carla N., Villalta, Mauren, Gutiérrez, José María, Fox, Jay W.

Journal:

Journal of Proteome Research

Année:

2012

Langue:

english

Fichier:

PDF, 2.32 MB

english, 2012

19

Extremely Abundant Antimicrobial Peptides Existed in the Skins of Nine Kinds of Chinese Odorous Frogs

Yang, Xinwang, Lee, Wen-Hui, Zhang, Yun

Journal:

Journal of Proteome Research

Année:

2012

Langue:

english

Fichier:

PDF, 4.75 MB

english, 2012

20

Hemorrhagic Activity of HF3, a Snake Venom Metalloproteinase: Insights from the Proteomic Analysis of Mouse Skin and Blood Plasma

Paes Leme, Adriana F., Sherman, Nicholas E., Smalley, David M., Sizukusa, Letícia O., Oliveira, Ana K., Menezes, Milene C., Fox, Jay W., Serrano, Solange M. T.

Journal:

Journal of Proteome Research

Année:

2012

Langue:

english

Fichier:

PDF, 2.78 MB

english, 2012

21

Investigation of Biomarkers of Bile Tolerance in Lactobacillus casei Using Comparative Proteomics

Hamon, Erwann, Horvatovich, Peter, Bisch, Magali, Bringel, Françoise, Marchioni, Eric, Aoudé-Werner, Dalal, Ennahar, Saïd

Journal:

Journal of Proteome Research

Année:

2012

Langue:

english

Fichier:

PDF, 2.93 MB

english, 2012

22

Proteomic Profiling of the Influence of Iron Availability on Cryptococcus gattii

Crestani, Juliana, Carvalho, Paulo Costa, Han, Xuemei, Seixas, Adriana, Broetto, Leonardo, Fischer, Juliana de Saldanha da Gama, Staats, Charley Christian, Schrank, Augusto, Yates, John R., Vainstein,

Journal:

Journal of Proteome Research

Année:

2012

Langue:

english

Fichier:

PDF, 3.86 MB

english, 2012

23

Proteomic Study of the Impact of Hik33 Mutation in Synechocystis sp. PCC 6803 under Normal and Salt Stress Conditions

Li, Tao, Yang, Hao-Meng, Cui, Su-Xia, Suzuki, Iwane, Zhang, Li-Fang, Li, Li, Bo, Ting-Ting, Wang, Jie, Murata, Norio, Huang, Fang

Journal:

Journal of Proteome Research

Année:

2012

Langue:

english

Fichier:

PDF, 3.50 MB

english, 2012

24

Proteomic Characterization of the Greening Process in Rice Seedlings Using the MS Spectral Intensity-based Label Free Method

Hamamoto, Kentaro, Aki, Toshihiko, Shigyo, Mikao, Sato, Shigeru, Ishida, Tetsuya, Yano, Kentaro, Yoneyama, Tadakatsu, Yanagisawa, Shuichi

Journal:

Journal of Proteome Research

Année:

2012

Langue:

english

Fichier:

PDF, 5.63 MB

english, 2012

25

Proteomics Techniques for the Development of Flood Tolerant Crops

Komatsu, Setsuko, Hiraga, Susumu, Yanagawa, Yuki

Journal:

Journal of Proteome Research

Année:

2012

Langue:

english

Fichier:

PDF, 3.93 MB

english, 2012

26

What is in a Beer? Proteomic Characterization and Relative Quantification of Hordein (Gluten) in Beer

Colgrave, Michelle L., Goswami, Hareshwar, Howitt, Crispin A., Tanner, Gregory J.

Journal:

Journal of Proteome Research

Année:

2012

Langue:

english

Fichier:

PDF, 1.98 MB

english, 2012

27

Proteomic Analysis of the Secretions of Pseudallescheria boydii , a Human Fungal Pathogen with Unknown Genome

da Silva, Bianca Alcântara, Sodré, Cátia Lacerda, Souza-Gonçalves, Ana Luiza, Aor, Ana Carolina, Kneipp, Lucimar Ferreira, Fonseca, Beatriz Bastos, Rozental, Sonia, Romanos, Maria Teresa Villela, Sola

Journal:

Journal of Proteome Research

Année:

2012

Langue:

english

Fichier:

PDF, 7.18 MB

english, 2012

28

Mapping N-Linked Glycosylation Sites in the Secretome and Whole Cells of Aspergillus niger Using Hydrazide Chemistry and Mass Spectrometry

Wang, Lu, Aryal, Uma K., Dai, Ziyu, Mason, Alisa C., Monroe, Matthew E., Tian, Zhi-Xin, Zhou, Jian-Ying, Su, Dian, Weitz, Karl K., Liu, Tao, Camp, David G., Smith, Richard D., Baker, Scott E., Qian, W

Journal:

Journal of Proteome Research

Année:

2012

Langue:

english

Fichier:

PDF, 3.33 MB

english, 2012

29

Mass Spectrometry-Based Analysis of Proteomic Changes in the Root Tips of Flooded Soybean Seedlings

Nanjo, Yohei, Skultety, Ludovit, Uváčková, L'ubica, Klubicová, Katarína, Hajduch, Martin, Komatsu, Setsuko

Journal:

Journal of Proteome Research

Année:

2012

Langue:

english

Fichier:

PDF, 1.03 MB

english, 2012

30

Improved Proteomic Approach for the Discovery of Potential Vaccine Targets in Trypanosoma cruzi

Nakayasu, Ernesto S., Sobreira, Tiago J. P., Torres, Rafael, Ganiko, Luciane, Oliveira, Paulo S. L., Marques, Alexandre F., Almeida, Igor C.

Journal:

Journal of Proteome Research

Année:

2012

Langue:

english

Fichier:

PDF, 1.30 MB

english, 2012

31

Proteogenomic Analysis of Candida glabrata using High Resolution Mass Spectrometry

Prasad, T. S. Keshava, Harsha, H. C., Keerthikumar, Shivakumar, Sekhar, Nirujogi Raja, Selvan, Lakshmi Dhevi N., Kumar, Praveen, Pinto, Sneha M., Muthusamy, Babylakshmi, Subbannayya, Yashwanth, Renuse

Journal:

Journal of Proteome Research

Année:

2012

Langue:

english

Fichier:

PDF, 742 KB

english, 2012

32

Proteomic Analysis of Early-Responsive Redox-Sensitive Proteins in Arabidopsis

Wang, Hai, Wang, Shengbing, Lu, Yuqing, Alvarez, Sophie, Hicks, Leslie M., Ge, Xiaochun, Xia, Yiji

Journal:

Journal of Proteome Research

Année:

2012

Langue:

english

Fichier:

PDF, 2.63 MB

english, 2012

33

Plant Proteomics Coming of Age

Komatsu, Setsuko, van Wijk, Klaas J.

Journal:

Journal of Proteome Research

Année:

2012

Langue:

english

Fichier:

PDF, 110 KB

english, 2012

34

Catabolic Pathway of Gamma-caprolactone in the Biocontrol Agent Rhodococcus erythropolis

Barbey, Corinne, Crépin, Alexandre, Cirou, Amélie, Budin-Verneuil, Aurélie, Orange, Nicole, Feuilloley, Marc, Faure, Denis, Dessaux, Yves, Burini, Jean-François, Latour, Xavier

Journal:

Journal of Proteome Research

Année:

2012

Langue:

english

Fichier:

PDF, 3.49 MB

english, 2012

35

Phosphorylation of Yeast Transcription Factors Correlates with the Evolution of Novel Sequence and Function

Kaganovich, Mark, Snyder, Michael

Journal:

Journal of Proteome Research

Année:

2012

Langue:

english

Fichier:

PDF, 2.63 MB

english, 2012

36

Secretome of the Free-living Mycelium from the Ectomycorrhizal Basidiomycete Laccaria bicolor

Vincent, Delphine, Kohler, Annegret, Claverol, Stephane, Solier, Emilie, Joets, Johann, Gibon, Julien, Lebrun, Marc-Henri, Plomion, Christophe, Martin, Francis

Journal:

Journal of Proteome Research

Année:

2012

Langue:

english

Fichier:

PDF, 11.48 MB

english, 2012

37

Physiological Changes in Green Stems of Vitis vinifera L. cv. Chardonnay in Response to Esca Proper and Apoplexy Revealed by Proteomic and Transcriptomic Analyses

Spagnolo, Alessandro, Magnin-Robert, Maryline, Alayi, Tchilabalo Dilezitoko, Cilindre, Clara, Mercier, Laurence, Schaeffer-Reiss, Christine, Van Dorsselaer, Alain, Clément, Christophe, Fontaine, Flore

Journal:

Journal of Proteome Research

Année:

2012

Langue:

english

Fichier:

PDF, 3.51 MB

english, 2012

38

Interactome of the Plant-specific ESCRT-III Component AtVPS2.2 in Arabidopsis thaliana

Ibl, Verena, Csaszar, Edina, Schlager, Nicole, Neubert, Susanne, Spitzer, Christoph, Hauser, Marie-Theres

Journal:

Journal of Proteome Research

Année:

2012

Langue:

english

Fichier:

PDF, 5.67 MB

english, 2012

39

Comparative Proteomic Study Reveals the Involvement of Diurnal Cycle in Cell Division, Enlargement, and Starch Accumulation in Developing Endosperm of Oryza sativa

Yu, Hua Tao, Xu, Sheng Bao, Zheng, Can Hui, Wang, Tai

Journal:

Journal of Proteome Research

Année:

2012

Langue:

english

Fichier:

PDF, 6.48 MB

english, 2012

40

Inhibition of Type I Interferon Production via Suppressing IKK-Gamma Expression: A New Strategy for Counteracting Host Antiviral Defense by Influenza A Viruses?

Wang, Yimeng, Zhou, Jianhong, Ruan, Chuanmin, Du, Yuchun

Journal:

Journal of Proteome Research

Année:

2012

Langue:

english

Fichier:

PDF, 4.40 MB

english, 2012

41

Proteomic and Transcriptomic Analyses of Rigid and Membranous Cuticles and Epidermis from the Elytra and Hindwings of the Red Flour Beetle, Tribolium castaneum

Dittmer, Neal T., Hiromasa, Yasuaki, Tomich, John M., Lu, Nanyan, Beeman, Richard W., Kramer, Karl J., Kanost, Michael R.

Journal:

Journal of Proteome Research

Année:

2012

Langue:

english

Fichier:

PDF, 4.30 MB

english, 2012

42

Extracellular Polysaccharide-Degrading Proteome of Butyrivibrio proteoclasticus

Dunne, Jonathan C., Li, Dong, Kelly, William J., Leahy, Sinead C., Bond, Judy J., Attwood, Graeme T., Jordan, T. William

Journal:

Journal of Proteome Research

Année:

2012

Langue:

english

Fichier:

PDF, 4.04 MB

english, 2012