Volume 10; Issue 11

Journal of Proteome Research

Volume 10; Issue 11

1

Global Survey of the Bovine Salivary Proteome: Integrating Multidimensional Prefractionation, Targeted, and Glycocapture Strategies

Ang, Ching-Seng, Binos, Steve, Knight, Matthew I, Moate, Peter J, Cocks, Benjamin G, McDonagh, Matthew B

Journal:

Journal of Proteome Research

Année:

2011

Langue:

english

Fichier:

PDF, 2.71 MB

english, 2011

2

Standardization of a Sample Preparation and Analytical Workflow for Proteomics of Archival Endometrial Cancer Tissue

Alkhas, Addie, Hood, Brian L., Oliver, Kate, Teng, Pang-ning, Oliver, Julie, Mitchell, David, Hamilton, Chad A., Maxwell, G. Larry, Conrads, Thomas P.

Journal:

Journal of Proteome Research

Année:

2011

Langue:

english

Fichier:

PDF, 864 KB

english, 2011

3

Characterization of the Secretome of Chickpea Suspension Culture Reveals Pathway Abundance and the Expected and Unexpected Secreted Proteins

Gupta, Sonika, Wardhan, Vijay, Verma, Shikha, Gayali, Saurabh, Rajamani, Uma, Datta, Asis, Chakraborty, Subhra, Chakraborty, Niranjan

Journal:

Journal of Proteome Research

Année:

2011

Langue:

english

Fichier:

PDF, 972 KB

english, 2011

4

Metabolomics Unveils Urinary Changes in Subjects with Metabolic Syndrome following 12-Week Nut Consumption

Tulipani, Sara, Llorach, Rafael, Jáuregui, Olga, López-Uriarte, Patricia, Garcia-Aloy, Mar, Bullo, Mònica, Salas-Salvadó, Jordi, Andrés-Lacueva, Cristina

Journal:

Journal of Proteome Research

Année:

2011

Langue:

english

Fichier:

PDF, 2.46 MB

english, 2011

5

Quantitative Proteomic Identification of the BRCA1 Ubiquitination Substrates

Song, Meihua, Hakala, Kevin, Weintraub, Susan T., Shiio, Yuzuru

Journal:

Journal of Proteome Research

Année:

2011

Langue:

english

Fichier:

PDF, 2.36 MB

english, 2011

6

Assimilatory Potential of Helicoverpa armigera Reared on Host ( Chickpea ) and Nonhost ( Cassia tora ) Diets

Dawkar, Vishal V., Chikate, Yojana R., Gupta, Vidya S., Slade, Susan E., Giri, Ashok P.

Journal:

Journal of Proteome Research

Année:

2011

Langue:

english

Fichier:

PDF, 2.83 MB

english, 2011

7

Characterization of the Human Submandibular/Sublingual Saliva Glycoproteome Using Lectin Affinity Chromatography Coupled to Multidimensional Protein Identification Technology

Gonzalez-Begne, Mireya, Lu, Bingwen, Liao, Lujian, Xu, Tao, Bedi, Gurrinder, Melvin, James E., Yates, John R.

Journal:

Journal of Proteome Research

Année:

2011

Langue:

english

Fichier:

PDF, 2.92 MB

english, 2011

8

Comprehensive Proteomic Study Identifies Serpin and Cystatin Antiproteases as Novel Correlates of HIV-1 Resistance in the Cervicovaginal Mucosa of Female Sex Workers

Burgener, A., Rahman, S., Ahmad, R., Lajoie, J., Ramdahin, S., Mesa, C., Brunet, S., Wachihi, C., Kimani, J., Fowke, K., Carr, S., Plummer, F., Ball, T. B.

Journal:

Journal of Proteome Research

Année:

2011

Langue:

english

Fichier:

PDF, 1.96 MB

english, 2011

9

Dietary Supplementation with l -Arginine Partially Counteracts Serum Metabonome Induced by Weaning Stress in Piglets

He, Qinghua, Tang, Huiru, Ren, Pingping, Kong, Xiangfeng, Wu, Guoyao, Yin, Yulong, Wang, Yulan

Journal:

Journal of Proteome Research

Année:

2011

Langue:

english

Fichier:

PDF, 1.41 MB

english, 2011

10

Discovery of a Novel B-Raf Fusion Protein Related to c-Met Drug Resistance

Dillon, Roslyn, Nilsson, Carol L., Shi, Stone D.-H, Lee, Nathan V., Krastins, Bryan, Greig, Michael J.

Journal:

Journal of Proteome Research

Année:

2011

Langue:

english

Fichier:

PDF, 3.55 MB

english, 2011

11

Dynamic Metabolic Response of Mice to Acute Mequindox Exposure

Zhao, Xiu-Ju, Huang, Chongyang, Lei, Hehua, Nie, Xiu, Tang, Huiru, Wang, Yulan

Journal:

Journal of Proteome Research

Année:

2011

Langue:

english

Fichier:

PDF, 2.59 MB

english, 2011

12

Identification and Characterization of Apelin Peptides in Bovine Colostrum and Milk by Liquid Chromatography–Mass Spectrometry

Mesmin, Cédric, Fenaille, François, Becher, François, Tabet, Jean-Claude, Ezan, Eric

Journal:

Journal of Proteome Research

Année:

2011

Langue:

english

Fichier:

PDF, 4.61 MB

english, 2011

13

Identification of PRDX4 and P4HA2 as Metastasis-Associated Proteins in Oral Cavity Squamous Cell Carcinoma by Comparative Tissue Proteomics of Microdissected Specimens Using iTRAQ Technology

Chang, Kai-Ping, Yu, Jau-Song, Chien, Kun-Yi, Lee, Chien-Wei, Liang, Ying, Liao, Chun-Ta, Yen, Tzu-Chen, Lee, Li-Yu, Huang, Ling-Ling, Liu, Shiau-Chin, Chang, Yu-Sun, Chi, Lang-Ming

Journal:

Journal of Proteome Research

Année:

2011

Langue:

english

Fichier:

PDF, 4.33 MB

english, 2011

14

Mass Spectrometry Analysis and Quantitation of Peptides Presented on the MHC II Molecules of Mouse Spleen Dendritic Cells

Bozzacco, Leonia, Yu, Haiqiang, A. Zebroski, Henry, Dengjel, Jörn, Deng, Haiteng, Mojsov, Svetlana, Steinman, Ralph M.

Journal:

Journal of Proteome Research

Année:

2011

Langue:

english

Fichier:

PDF, 3.70 MB

english, 2011

15

Molecular Characterization of Zebrafish Embryogenesis via DNA Microarrays and Multiplatform Time Course Metabolomics Studies

Soanes, Kelly H., Achenbach, John C., Burton, Ian W., Hui, Joseph P. M., Penny, Susanne L., Karakach, Tobias K.

Journal:

Journal of Proteome Research

Année:

2011

Langue:

english

Fichier:

PDF, 4.65 MB

english, 2011

16

Plasma Profiling Reveals Human Fibulin-1 as Candidate Marker for Renal Impairment

Neiman, Maja, Hedberg, Jesper J., Dönnes, Pierre R., Schuppe-Koistinen, Ina, Hanschke, Stephan, Schindler, Ralf, Uhlén, Mathias, Schwenk, Jochen M., Nilsson, Peter

Journal:

Journal of Proteome Research

Année:

2011

Langue:

english

Fichier:

PDF, 3.06 MB

english, 2011

17

Proteomic Dissection of the von Hippel–Lindau (VHL) Interactome

Lai, Yanlai, Song, Meihua, Hakala, Kevin, Weintraub, Susan T., Shiio, Yuzuru

Journal:

Journal of Proteome Research

Année:

2011

Langue:

english

Fichier:

PDF, 4.40 MB

english, 2011

18

Response to: The Problem with Peptide Presumption and Low Mascot Scoring

Cottrell, John S., Creasy, David M.

Journal:

Journal of Proteome Research

Année:

2011

Langue:

english

Fichier:

PDF, 848 KB

english, 2011

19

SILAC Compatible Strain of Pichia pastoris for Expression of Isotopically Labeled Protein Standards and Quantitative Proteomics

Austin, Ryan J., Kuestner, Rolf E., Chang, Debbie K., Madden, Knut R., Martin, Daniel B.

Journal:

Journal of Proteome Research

Année:

2011

Langue:

english

Fichier:

PDF, 4.37 MB

english, 2011

20

Serum Levels of Pregnancy Zone Protein are Elevated in Presymptomatic Alzheimer’s Disease

IJsselstijn, Linda, Dekker, Lennard J. M., Stingl, Christoph, van der Weiden, Marcel M., Hofman, Albert, Kros, Johan M., Koudstaal, Peter J., Sillevis Smitt, Peter A. E., Ikram, M. Arfan, Breteler, Mo

Journal:

Journal of Proteome Research

Année:

2011

Langue:

english

Fichier:

PDF, 4.63 MB

english, 2011

21

The Cardiovascular Risk of Healthy Individuals Studied by NMR Metabonomics of Plasma Samples

Bernini, Patrizia, Bertini, Ivano, Luchinat, Claudio, Tenori, Leonardo, Tognaccini, Adriana

Journal:

Journal of Proteome Research

Année:

2011

Langue:

english

Fichier:

PDF, 1.10 MB

english, 2011

22

Thermodynamic Analysis of Protein–Ligand Interactions in Complex Biological Mixtures using a Shotgun Proteomics Approach

DeArmond, Patrick D., Xu, Ying, Strickland, Erin C., Daniels, Kyle G., Fitzgerald, Michael C.

Journal:

Journal of Proteome Research

Année:

2011

Langue:

english

Fichier:

PDF, 2.21 MB

english, 2011

23

Quantitative Neuroproteomics of an In Vivo Rodent Model of Focal Cerebral Ischemia/Reperfusion Injury Reveals a Temporal Regulation of Novel Pathophysiological Molecular Markers

Datta, Arnab, Jingru, Qian, Khor, Tze Hsin, Teo, Muh Tyng, Heese, Klaus, Sze, Siu Kwan

Journal:

Journal of Proteome Research

Année:

2011

Langue:

english

Fichier:

PDF, 3.30 MB

english, 2011

24

Magic Angle Spinning NMR-Based Metabolic Profiling of Head and Neck Squamous Cell Carcinoma Tissues

Somashekar, Bagganahalli S., Kamarajan, Pachiyappan, Danciu, Theodora, Kapila, Yvonne L., Chinnaiyan, Arul M., Rajendiran, Thekkelnaycke M., Ramamoorthy, Ayyalusamy

Journal:

Journal of Proteome Research

Année:

2011

Langue:

english

Fichier:

PDF, 4.08 MB

english, 2011

25

Amine Metabolomics of Hyperglycemic Endothelial Cells using Capillary LC–MS with Isobaric Tagging

Yuan, Wei, Zhang, Junxiang, Li, Shuwei, Edwards, James L.

Journal:

Journal of Proteome Research

Année:

2011

Langue:

english

Fichier:

PDF, 1.54 MB

english, 2011

26

Screening Novel Biomarkers for Metabolic Syndrome by Profiling Human Plasma N-Glycans in Chinese Han and Croatian Populations

Lu, Jia-Peng, Knežević, Ana, Wang, You-Xin, Rudan, Igor, Campbell, Harry, Zou, Zhi-Kang, Lan, Jie, Lai, Qing-Xuan, Wu, Jing-Jing, He, Yan, Song, Man-Shu, Zhang, Ling, Lauc, Gordan, Wang, Wei

Journal:

Journal of Proteome Research

Année:

2011

Langue:

english

Fichier:

PDF, 2.10 MB

english, 2011

27

Quantitative Proteomic Analysis of the Adipocyte Plasma Membrane

Prior, Matthew J., Larance, Mark, Lawrence, Robert T., Soul, Jamie, Humphrey, Sean, Burchfield, James, Kistler, Carol, Davey, Jonathon R., La-Borde, Penelope J., Buckley, Michael, Kanazawa, Hiroshi, P

Journal:

Journal of Proteome Research

Année:

2011

Langue:

english

Fichier:

PDF, 4.38 MB

english, 2011

28

Ookinete-Interacting Proteins on the Microvillar Surface are Partitioned into Detergent Resistant Membranes of Anopheles gambiae Midguts

Parish, Lindsay A., Colquhoun, David R., Mohien, Ceereena Ubaida, Lyashkov, Alexey E., Graham, David R., Dinglasan, Rhoel R.

Journal:

Journal of Proteome Research

Année:

2011

Langue:

english

Fichier:

PDF, 3.88 MB

english, 2011

29

Data Analysis Strategy for Maximizing High-Confidence Protein Identifications in Complex Proteomes Such as Human Tumor Secretomes and Human Serum

Wang, Huan, Tang, Hsin-Yao, Tan, Glenn C., Speicher, David W.

Journal:

Journal of Proteome Research

Année:

2011

Langue:

english

Fichier:

PDF, 4.13 MB

english, 2011

30

Comprehensive Proteome Analysis of Hippocampus, Brainstem, and Spinal Cord from Paralytic and Furious Dogs Naturally Infected with Rabies

Thanomsridetchai, Natthapaninee, Singhto, Nilubon, Tepsumethanon, Veera, Shuangshoti, Shanop, Wacharapluesadee, Supaporn, Sinchaikul, Supachok, Chen, Shui-Tein, Hemachudha, Thiravat, Thongboonkerd, Vi

Journal:

Journal of Proteome Research

Année:

2011

Langue:

english

Fichier:

PDF, 3.52 MB

english, 2011

31

Identification of a Panel of Novel Serum Osteoarthritis Biomarkers

Fernández-Puente, Patricia, Mateos, Jesús, Fernández-Costa, Carolina, Oreiro, Natividad, Fernández-López, Carlos, Ruiz-Romero, Cristina, Blanco, Francisco J.

Journal:

Journal of Proteome Research

Année:

2011

Langue:

english

Fichier:

PDF, 2.61 MB

english, 2011

32

Unbiased Functional Proteomics Strategy for Protein Kinase Inhibitor Validation and Identification of bona fide Protein Kinase Substrates: Application to Identification of EEF1D as a Substrate for CK2

Gyenis, Laszlo, Duncan, James S., Turowec, Jacob P., Bretner, Maria, Litchfield, David W.

Journal:

Journal of Proteome Research

Année:

2011

Langue:

english

Fichier:

PDF, 3.09 MB

english, 2011

33

MAP1B and Clathrin Are Novel Interacting Partners of the Giant Cyto-linker Dystonin

Bhanot, Kunal, Young, Kevin G., Kothary, Rashmi

Journal:

Journal of Proteome Research

Année:

2011

Langue:

english

Fichier:

PDF, 3.12 MB

english, 2011

34

Subcellular Tissue Proteomics of Hepatocellular Carcinoma for Molecular Signature Discovery

Lee, Yong-Yook, McKinney, Kimberly Q., Ghosh, Sriparna, Iannitti, David A., Martinie, John B., Caballes, F. Ryan, Russo, Mark W., Ahrens, William A., Lundgren, Deborah H., Han, David K., Bonkovsky, He

Journal:

Journal of Proteome Research

Année:

2011

Langue:

english

Fichier:

PDF, 5.46 MB

english, 2011

35

Large-Scale Identification of Bacteria–Host Crosstalk by Affinity Chromatography: Capturing the Interactions of Streptococcus suis Proteins with Host Cells

Chen, Bo, Zhang, Anding, Xu, Zhongmin, Li, Ran, Chen, Huanchun, Jin, Meilin

Journal:

Journal of Proteome Research

Année:

2011

Langue:

english

Fichier:

PDF, 3.50 MB

english, 2011

36

jTraML: An Open Source Java API for TraML, the PSI Standard for Sharing SRM Transitions

Helsens, Kenny, Brusniak, Mi-Youn, Deutsch, Eric, Moritz, Robert L., Martens, Lennart

Journal:

Journal of Proteome Research

Année:

2011

Langue:

english

Fichier:

PDF, 2.05 MB

english, 2011