Volume 306; Issue 2

Journal of Molecular Biology

Volume 306; Issue 2

1

Binding free energies and free energy components from molecular dynamics and Poisson-Boltzmann calculations. Application to amino acid recognition by aspartyl-tRNA synthetase

Georgios Archontis, Thomas Simonson, Martin Karplus

Journal:

Journal of Molecular Biology

Année:

2001

Langue:

english

Fichier:

PDF, 592 KB

english, 2001

2

Exploration of partially unfolded states of human α-lactalbumin by molecular dynamics simulation

Emanuele Paci, Lorna J. Smith, Christopher M. Dobson, Martin Karplus

Journal:

Journal of Molecular Biology

Année:

2001

Langue:

english

Fichier:

PDF, 941 KB

english, 2001

3

Interaction of the C-terminal domain of the E. coli RNA polymerase α subunit with the UP element: recognizing the backbone structure in the minor groove surface

Kazuhiro Yasuno, Toshio Yamazaki, Yoshiyuki Tanaka, Takashi S Kodama, Akimasa Matsugami, Masato Katahira, Akira Ishihama, Yoshimasa Kyogoku

Journal:

Journal of Molecular Biology

Année:

2001

Langue:

english

Fichier:

PDF, 567 KB

english, 2001

4

Conformation and rigidity of DNA microcircles containing waf1 response element for p53 regulatory protein

Haijun Zhou, Yang Zhang, Zhong-can Ou-Yang, Stuart M. Lindsay, Xi-Z. Feng, Pichumani Balagurumoorthy, Rodney E. Harrington

Journal:

Journal of Molecular Biology

Année:

2001

Langue:

english

Fichier:

PDF, 334 KB

english, 2001

5

Alkylating agent and chromatin structure determine sequence context-dependent formation of alkylpurines

Jean-François Cloutier, Andre Castonguay, Timothy R O’Connor, Régen Drouin

Journal:

Journal of Molecular Biology

Année:

2001

Langue:

english

Fichier:

PDF, 928 KB

english, 2001

6

Dissecting the interaction network of multiprotein complexes by pairwise coexpression of subunits in E. coli

Sébastien Fribourg, Christophe Romier, Sebastiaan Werten, Yann-Gaël Gangloff, Arnaud Poterszman, Dino Moras

Journal:

Journal of Molecular Biology

Année:

2001

Langue:

english

Fichier:

PDF, 322 KB

english, 2001

7

Crystal structure and site-directed mutagenesis studies of N-carbamoyl-d-amino-acid amidohydrolase from Agrobacterium radiobacter reveals a homotetramer and insight into a catalytic cleft

Wen-Ching Wang, Wen-Hwei Hsu, Fan-Tso Chien, Cheng-Yu Chen

Journal:

Journal of Molecular Biology

Année:

2001

Langue:

english

Fichier:

PDF, 602 KB

english, 2001

8

Crystal structure of the NADP(H)-dependent ketose reductase from Bemisia argentifolii at 2.3 Å resolution

Mark J Banfield, Michael E Salvucci, Edward N Baker, Clyde A Smith

Journal:

Journal of Molecular Biology

Année:

2001

Langue:

english

Fichier:

PDF, 809 KB

english, 2001

9

Interaction of tyrosine 65 of RecA protein with the first and second DNA strands

Katsumi Morimatsu, Takeo Funakoshi, Toshihiro Horii, Masayuki Takahashi

Journal:

Journal of Molecular Biology

Année:

2001

Langue:

english

Fichier:

PDF, 231 KB

english, 2001

10

The in vivo conformation of the plastid DNA of Toxoplasma gondii: implications for replication

D.H Williamson, P.W Denny, P.W Moore, S Sato, S McCready, R.J.M.(Iain) Wilson

Journal:

Journal of Molecular Biology

Année:

2001

Langue:

english

Fichier:

PDF, 351 KB

english, 2001

11

Dissection of the promoter region of the inositol 1,4,5-trisphosphate receptor gene, itr-1, in C. elegans: a molecular basis for cell-specific expression of IP3R isoforms

Nicholas J.D Gower, Gillian R Temple, Jacqueline E Schein, Marco Marra, Denise S Walker, Howard A Baylis

Journal:

Journal of Molecular Biology

Année:

2001

Langue:

english

Fichier:

PDF, 698 KB

english, 2001

12

Solution structure and dynamics of an open β-sheet, glycolytic enzyme, monomeric 23.7 kDa phosphoglycerate mutase from Schizosaccharomyces pombe

Stanislava Uhrı́nová, Dušan Uhrı́n, Jacqueline Nairn, Nicholas C. Price, Linda A. Fothergill-Gilmore, Paul N. Barlow

Journal:

Journal of Molecular Biology

Année:

2001

Langue:

english

Fichier:

PDF, 661 KB

english, 2001

13

A repeated β-turn structure in Poly(Ala-Gly) as a model for silk I of Bombyx mori silk fibroin studied with two-dimensional spin-diffusion NMR under off magic angle spinning and rotational echo double resonance

Tetsuo Asakura, Jun Ashida, Tsutomu Yamane, Tsunenori Kameda, Yasumoto Nakazawa, Kosuke Ohgo, Kohei Komatsu

Journal:

Journal of Molecular Biology

Année:

2001

Langue:

english

Fichier:

PDF, 450 KB

english, 2001

14

NMR identification of the Tom20 binding segment in mitochondrial presequences

Takanori Muto, Takayuki Obita, Yoshito Abe, Toshihiro Shodai, Toshiya Endo, Daisuke Kohda

Journal:

Journal of Molecular Biology

Année:

2001

Langue:

english

Fichier:

PDF, 248 KB

english, 2001

15

Apparent two-state tendamistat folding is a sequential process along a defined route

Annett Bachmann, Thomas Kiefhaber

Journal:

Journal of Molecular Biology

Année:

2001

Langue:

english

Fichier:

PDF, 366 KB

english, 2001

16

Non-α-helical elements modulate polytopic membrane protein architecture

R.Peter Riek, Isidore Rigoutsos, Jiri Novotny, Robert M Graham

Journal:

Journal of Molecular Biology

Année:

2001

Langue:

english

Fichier:

PDF, 1.18 MB

english, 2001

17

Modulation of Sp1 activity by a cyclin A/CDK complex

Eva Haidweger, Michael Novy, Hans Rotheneder

Journal:

Journal of Molecular Biology

Année:

2001

Langue:

english

Fichier:

PDF, 328 KB

english, 2001

18

Identification of the domain in the human interleukin-11 receptor that mediates ligand binding

Karin Schleinkofer, Andrew Dingley, Ingrid Tacken, Matthias Federwisch, Gerhard Müller-Newen, Peter C Heinrich, Patricia Vusio, Yannick Jacques, Joachim Grötzinger

Journal:

Journal of Molecular Biology

Année:

2001

Langue:

english

Fichier:

PDF, 338 KB

english, 2001