A. van Oudenaarden : rechercher sur Z-Library

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51

Biomimetic Systems for Studying Actin-Based Motility

Arpita Upadhyaya, Alexander van Oudenaarden

Journal:

Current Biology

Année:

2003

Langue:

english

Fichier:

PDF, 283 KB

english, 2003

52

Actin Polymerization: Forcing Flat Faces Forward

Arpita Upadhyaya, Alexander van Oudenaarden

Journal:

Current Biology

Année:

2004

Langue:

english

Fichier:

PDF, 110 KB

english, 2004

53

The thrombospondin repeat containing protein MIG-21 controls a left–right asymmetric Wnt signaling response in migrating C. elegans neuroblasts

Teije C. Middelkoop, Lisa Williams, Pei-Tzu Yang, Jeroen Luchtenberg, Marco C. Betist, Ni Ji, Alexander van Oudenaarden, Cynthia Kenyon, Hendrik C. Korswagen

Journal:

Developmental Biology

Année:

2012

Langue:

english

Fichier:

PDF, 1.52 MB

english, 2012

54

Single-Cell Expression Analyses during Cellular Reprogramming Reveal an Early Stochastic and a Late Hierarchic Phase

Yosef Buganim, Dina A. Faddah, Albert W. Cheng, Elena Itskovich, Styliani Markoulaki, Kibibi Ganz, Sandy L. Klemm, Alexander van Oudenaarden, Rudolf Jaenisch

Journal:

Année:

2012

Langue:

english

Fichier:

PDF, 55 KB

english, 2012

55

When It Comes to Decisions, Myeloid Progenitors Crave Positive Feedback

Dale Muzzey, Alexander van Oudenaarden

Journal:

Année:

2006

Langue:

english

Fichier:

PDF, 299 KB

english, 2006

56

A Systems-Level Analysis of Perfect Adaptation in Yeast Osmoregulation

Dale Muzzey, Carlos A. Gómez-Uribe, Jerome T. Mettetal, Alexander van Oudenaarden

Journal:

Année:

2009

Langue:

english

Fichier:

PDF, 2.18 MB

english, 2009

57

Elevated ATPase Activity of KaiC Applies a Circadian Checkpoint on Cell Division in Synechococcus elongatus

Guogang Dong, Qiong Yang, Qiang Wang, Yong-Ick Kim, Thammajun L. Wood, Katherine W. Osteryoung, Alexander van Oudenaarden, Susan S. Golden

Journal:

Année:

2010

Langue:

english

Fichier:

PDF, 961 KB

english, 2010

58

Optimality in the Development of Intestinal Crypts

Shalev Itzkovitz, Irene C. Blat, Tyler Jacks, Hans Clevers, Alexander van Oudenaarden

Journal:

Année:

2012

Langue:

english

Fichier:

PDF, 1.09 MB

english, 2012

59

A System of Counteracting Feedback Loops Regulates Cdc42p Activity during Spontaneous Cell Polarization

Ertugrul M. Ozbudak, Attila Becskei, Alexander van Oudenaarden

Journal:

Developmental Cell

Année:

2005

Langue:

english

Fichier:

PDF, 297 KB

english, 2005

60

Stochastic gene expression: from single molecules to the proteome

Benjamin B Kaufmann, Alexander van Oudenaarden

Journal:

Current Opinion in Genetics & Development

Année:

2007

Langue:

english

Fichier:

PDF, 344 KB

english, 2007

61

Coupling cellular oscillators—circadian and cell division cycles in cyanobacteria

Bernardo F Pando, Alexander van Oudenaarden

Journal:

Current Opinion in Genetics & Development

Année:

2010

Langue:

english

Fichier:

PDF, 387 KB

english, 2010

62

Genome-wide Dissection of MicroRNA Functions and Cotargeting Networks Using Gene Set Signatures

John S. Tsang, Margaret S. Ebert, Alexander van Oudenaarden

Journal:

Année:

2010

Langue:

english

Fichier:

PDF, 1.04 MB

english, 2010

63

Single-Cell Analysis Reveals that Noncoding RNAs Contribute to Clonal Heterogeneity by Modulating Transcription Factor Recruitment

Stacie L. Bumgarner, Gregor Neuert, Benjamin F. Voight, Anna Symbor-Nagrabska, Paula Grisafi, Alexander van Oudenaarden, Gerald R. Fink

Journal:

Année:

2012

Langue:

english

Fichier:

PDF, 1.57 MB

english, 2012

64

How to Regulate a Gene: To Repress or to Activate?

Nikolai Slavov, Alexander van Oudenaarden

Journal:

Année:

2012

Langue:

english

Fichier:

PDF, 65 KB

english, 2012

65

When Noisy Neighbors Are a Blessing: Analysis of Gene Expression Noise Identifies Coregulated Genes

Jan Philipp Junker, Alexander van Oudenaarden

Journal:

Année:

2012

Langue:

english

Fichier:

PDF, 100 KB

english, 2012

66

Neural-specific Sox2 input and differential Gli-binding affinity provide context and positional information in Shh-directed neural patterning

Peterson, K. A., Nishi, Y., Ma, W., Vedenko, A., Shokri, L., Zhang, X., McFarlane, M., Baizabal, J.-M., Junker, J. P., van Oudenaarden, A., Mikkelsen, T., Bernstein, B. E., Bailey, T. L., Bulyk, M. L.

Journal:

Genes & Development

Année:

2012

Langue:

english

Fichier:

PDF, 2.39 MB

english, 2012

67

Transcription of Two Long Noncoding RNAs Mediates Mating-Type Control of Gametogenesis in Budding Yeast

van Werven, Folkert J., Neuert, Gregor, Hendrick, Natalie, Lardenois, Aurélie, Buratowski, Stephen, van Oudenaarden, Alexander, Primig, Michael, Amon, Angelika

Journal:

Année:

2012

Langue:

english

Fichier:

PDF, 1.57 MB

english, 2012

68

Attenuation of Noise in Ultrasensitive Signaling Cascades

Thattai, Mukund, van Oudenaarden, Alexander

Journal:

Biophysical Journal

Année:

2002

Langue:

english

Fichier:

PDF, 242 KB

english, 2002

69

Elastic Instability in Growing Yeast Colonies

Nguyen, Baochi, Upadhyaya, Arpita, van Oudenaarden, Alexander, Brenner, Michael P.

Journal:

Biophysical Journal

Année:

2004

Langue:

english

Fichier:

PDF, 176 KB

english, 2004

70

Systematic Identification of Signal-Activated Stochastic Gene Regulation

Neuert, G., Munsky, B., Tan, R. Z., Teytelman, L., Khammash, M., van Oudenaarden, A.

Journal:

Année:

2013

Langue:

english

Fichier:

PDF, 489 KB

english, 2013

71

Games Microbes Play: the Game Theory Behind Cooperative Sucrose Metabolism in Yeast

Gore, Jeff, Youk, Hyun, van Oudenaarden, Alexander

Journal:

Biophysical Journal

Année:

2010

Langue:

english

Fichier:

PDF, 42 KB

english, 2010

72

Identifying the Stem Cell of the Intestinal Crypt: Strategies and Pitfalls

Barker, Nick, van Oudenaarden, Alexander, Clevers, Hans

Journal:

Année:

2012

Langue:

english

Fichier:

PDF, 1.01 MB

english, 2012

73

A versatile genome-scale PCR-based pipeline for high-definition DNA FISH

Bienko, Magda, Crosetto, Nicola, Teytelman, Leonid, Klemm, Sandy, Itzkovitz, Shalev, van Oudenaarden, Alexander

Journal:

Année:

2012

Langue:

english

Fichier:

PDF, 623 KB

english, 2012

74

MicroRNAs can generate thresholds in target gene expression

Mukherji, Shankar, Ebert, Margaret S, Zheng, Grace X Y, Tsang, John S, Sharp, Phillip A, van Oudenaarden, Alexander

Journal:

Nature Genetics

Année:

2011

Langue:

english

Fichier:

PDF, 1.06 MB

english, 2011

75

Allele-specific detection of single mRNA molecules in situ

Hansen, Clinton H, van Oudenaarden, Alexander

Journal:

Année:

2013

Langue:

english

Fichier:

PDF, 915 KB

english, 2013

76

Single-molecule mRNA detection and counting in mammalian tissue

Lyubimova, Anna, Itzkovitz, Shalev, Junker, Jan Philipp, Fan, Zi Peng, Wu, Xuebing, van Oudenaarden, Alexander

Journal:

Nature Protocols

Année:

2013

Langue:

english

Fichier:

PDF, 1.39 MB

english, 2013

77

Brownian Ratchets: Molecular Separations in Lipid Bilayers Supported on Patterned Arrays

van Oudenaarden, A.

Journal:

Année:

1999

Langue:

english

Fichier:

PDF, 355 KB

english, 1999

78

Dampening of expression oscillations by synchronous regulation of a microRNA and its target

Kim, Dong hyun, Grün, Dominic, van Oudenaarden, Alexander

Journal:

Nature Genetics

Année:

2013

Langue:

english

Fichier:

PDF, 1.32 MB

english, 2013

79

Genetic and Phenotypic Diversity in Breast Tumor Metastases

Almendro, V., Kim, H. J., Cheng, Y.-K., Gonen, M., Itzkovitz, S., Argani, P., van Oudenaarden, A., Sukumar, S., Michor, F., Polyak, K.

Journal:

Cancer Research

Année:

2014

Langue:

english

Fichier:

PDF, 976 KB

english, 2014

80

Transcriptional profiling of cells sorted by RNA abundance

Klemm, Sandy, Semrau, Stefan, Wiebrands, Kay, Mooijman, Dylan, Faddah, Dina A, Jaenisch, Rudolf, van Oudenaarden, Alexander

Journal:

Année:

2014

Langue:

english

Fichier:

PDF, 3.23 MB

english, 2014

81

FuseFISH: Robust Detection of Transcribed Gene Fusions in Single Cells

Semrau, Stefan, Crosetto, Nicola, Bienko, Magda, Boni, Marina, Bernasconi, Paolo, Chiarle, Roberto, van Oudenaarden, Alexander

Journal:

Année:

2014

Langue:

english

Fichier:

PDF, 1.32 MB

english, 2014

82

Robustness and Epistasis in the C. elegans Vulval Signaling Network Revealed by Pathway Dosage Modulation

Barkoulas, Michalis, van Zon, Jeroen S., Milloz, Josselin, van Oudenaarden, Alexander, Félix, Marie-Anne

Journal:

Developmental Cell

Année:

2013

Langue:

english

Fichier:

PDF, 2.02 MB

english, 2013

83

Cooperative Sucrose Metabolism In Yeast Is A Snowdrift Game

Gore, Jeff, Youk, Hyun, van Oudenaarden, Alexander

Journal:

Biophysical Journal

Année:

2009

Langue:

english

Fichier:

PDF, 35 KB

english, 2009

84

Constant Growth Rate Can Be Supported by Decreasing Energy Flux and Increasing Aerobic Glycolysis

Slavov, Nikolai, Budnik, Bogdan A., Schwab, David, Airoldi, Edoardo M., van Oudenaarden, Alexander

Journal:

Année:

2014

Langue:

english

Fichier:

PDF, 1.19 MB

english, 2014

85

Nature, Nurture Or Just Blind Chance: Stochastic Gene Expression And Its Consequences

van Oudenaarden, Alexander

Journal:

Biophysical Journal

Année:

2009

Langue:

english

Fichier:

PDF, 32 KB

english, 2009

86

Effect of intra-uterine oestradiol-17β administration on inter-oestrous interval in the pig

van der Meulen, J., Elsaesser, F., Oudenaarden, C.P.J., Helmond, F.A.

Journal:

Animal Reproduction Science

Année:

1991

Langue:

english

Fichier:

PDF, 458 KB

english, 1991

87

Sensing and uptake of glucose in Saccharomyces cerevisiae

Youk, Hyun, van Oudenaarden, Alexander

Journal:

Biophysical Journal

Année:

2009

Langue:

english

Fichier:

PDF, 49 KB

english, 2009

88

MicroRNAs Reduce Gene Expression Noise

Schmiedel, Joern Matthias, Klemm, Sandy, Zheng, Yannan, Sahay, Apratim, Bluethgen, Nils, Marks, Debora S., van Oudenaarden, Alexander

Journal:

Biophysical Journal

Année:

2014

Langue:

english

Fichier:

PDF, 44 KB

english, 2014

89

Information Processing In Single Yeast Cells: Homogeneous Signal Transduction Result In Heterogeneous Gene Expression

Neuert, Gregor, van Oudenaarden, Alexander

Journal:

Biophysical Journal

Année:

2009

Langue:

english

Fichier:

PDF, 34 KB

english, 2009

90

Motility of ActA Protein-Coated Microspheres Driven by Actin Polymerization

Lisa A. Cameron, Matthew J. Footer, Alexander van Oudenaarden and Julie A. Theriot

Journal:

Proceedings of the National Academy of Sciences

Année:

1999

Langue:

english

Fichier:

PDF, 1.46 MB

english, 1999

91

Single-molecule transcript counting of stem-cell markers in the mouse intestine

Itzkovitz, Shalev, Lyubimova, Anna, Blat, Irene C., Maynard, Mindy, van Es, Johan, Lees, Jacqueline, Jacks, Tyler, Clevers, Hans, van Oudenaarden, Alexander

Journal:

Nature Cell Biology

Année:

2011

Langue:

english

Fichier:

PDF, 2.86 MB

english, 2011

92

Many human large intergenic noncoding RNAs associate with chromatin-modifying complexes and affect gene expression

Khalil, Ahmad M., Guttman, Mitchell, Huarte, Maite, Garber, Manuel, Raj, Arjun, Rivea Morales, Dianali, Thomas, Kelly, Presser, Aviva, Bernstein, Bradley E., van Oudenaarden, Alexander, Regev, Aviv, L

Journal:

Proceedings of the National Academy of Sciences

Année:

2009

Langue:

english

Fichier:

PDF, 687 KB

english, 2009

93

One-Dimensional Mott Insulator Formed by Quantum Vortices in Josephson Junction Arrays

van Oudenaarden, Alexander, Mooij, J. E.

Journal:

Physical Review Letters

Année:

1996

Langue:

english

Fichier:

PDF, 112 KB

english, 1996

94

Highly expressed loci are vulnerable to misleading ChIP localization of multiple unrelated proteins

Teytelman, L., Thurtle, D. M., Rine, J., van Oudenaarden, A.

Journal:

Proceedings of the National Academy of Sciences

Année:

2013

Langue:

english

Fichier:

PDF, 1.69 MB

english, 2013

95

A Predictive Model of Bifunctional Transcription Factor Signaling during Embryonic Tissue Patterning

Junker, Jan Philipp, Peterson, Kevin A., Nishi, Yuichi, Mao, Junhao, McMahon, Andrew P., van Oudenaarden, Alexander

Journal:

Developmental Cell

Année:

2014

Langue:

english

Fichier:

PDF, 3.62 MB

english, 2014

96

Conductance Fluctuations in a Metallic Wire Interrupted by a Tunnel Junction

van Oudenaarden, A., Devoret, M. H., Visscher, E. H., Nazarov, Yu. V., Mooij, J. E.

Journal:

Physical Review Letters

Année:

1997

Langue:

english

Fichier:

PDF, 199 KB

english, 1997

97

Spatially resolved transcriptomics and beyond

Crosetto, Nicola, Bienko, Magda, van Oudenaarden, Alexander

Journal:

Nature Reviews Genetics

Année:

2014

Langue:

english

Fichier:

PDF, 1.45 MB

english, 2014

98

RNA sequencing reveals two major classes of gene expression levels in metazoan cells

Hebenstreit, D., Fang, M., Gu, M., Charoensawan, V., van Oudenaarden, A., Teichmann, S. A.

Journal:

Molecular Systems Biology

Année:

2014

Langue:

english

Fichier:

PDF, 353 KB

english, 2014

99

One-Dimensional Localization of Quantum Vortices in Disordered Josephson Junction Arrays

van Oudenaarden, Alexander, Várdy, S. J. K., Mooij, J. E.

Journal:

Physical Review Letters

Année:

1996

Langue:

english

Fichier:

PDF, 142 KB

english, 1996

100

Deconvolving the roles of Wnt ligands and receptors in sensing and amplification

Tan, R. Z., Ji, N., Mentink, R. A., Korswagen, H. C., van Oudenaarden, A.

Journal:

Molecular Systems Biology

Année:

2014

Langue:

english

Fichier:

PDF, 515 KB

english, 2014